Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0640 ATGGAGAATCTGATACAGTTGGTGAACAAAATACAGAGAGCATGCACCGCCCTTGGGGATCACGGCGAGGAATCCGCATTGCCCACTCTATGGGATGCTCTTCCCTCTATCGCCGTCGTCGGTGGTCAGAGCTCTGGAAAATCTTCAGTTTTGGAAAGTATTGTTGGAAAGGACTTTTTACCTCGTGGATCTGGGATTGTTACTCGGCGTCCACTTGTTTTGCAACTTCATAAGATTGATGAAGGGAGAGAATATGGTGAATTTATGCACCTTCCAAGGAAGAAATTCACTGATTTTGCTGCTGTTAGGCAGGAAATCGCTGATGAGACCGATAGAGAAACAGGTCGCGCAAGGGTTGTGAATCTTACACTAGTGGATCTTCCGGGGCTTACAAAAGTTGCTGTTGAGGGTCAACCAGATAGCATTGTGCAAGACATCGAAAATATGGTTCGAGCCTTTATTGAAAAGATGTATGAGCACCTATGGTACAAGCTAAACTTCCAGAGCACAACATCATTGAAACCAAATTGCATCATTTTGGCAATATCTCCTGCCAATCAAGATCTTGCAACCTCAGATGCAATTAAGATTTCTCGCGAAGTAGACCCCAAAGGGGAAAGGACATTTGGAGTTTTGACAAAGATCGATCTTATGGACAAGGGTACTGATGCAGTTGATATCCTTGAAGGGAAAGCATATAAGCTAAACTACCCATGGATTGGTGTTGTTAATCGCTCCCAAGCTGATATCAATAAAAACGTTGATATGATCGCTGCTCGGCGTAGAGAAAATGAGTATTTTGCTAGTACCCCAGAATATAGACATCTTACTAGCAGAATGGGCTCTGTGCATCTAGGAAAGGTGCTATCCAAGCATTTGGAAACTGTCATCAAGTCTCGGATCCCAGGCCTTCAGTCACTTATTAGCAAGACTATTATTGACTTGGAGTCCGAACTGAACCGCATTGGGAAACCTATTGCTGCTGATACTGGAGGGAAGTTATACTTGGTAATGGAAATCTGTCGAAATTTTGATCAGATCTTTAAAGATCATCTTGATGGCATAAAGCCTGGTGGTGAGAAAATTTACCAAGTATTTGACAATCAATTTCCAGCAGCTCTAAAACGACTTCAGTTTGACAAGCATCTATCATTGGACACTGTGCGAAAGCTAATAACTGAAGCCGATGGATATCAACCACATCTCATCGCTCCTGAGAAAGGATATCGGCGTCTTATTGAATCTTGCTTAGTATCAATTAGGGGACCTGCTGAAGCAGCTGTTGATACGGTTCATGGAATTTTGAAGGATTTGATTCAGAAGTCTATGAATGAGACAGTGGCAAGTAGAAAATTGCTTATTGTCTTAACGGAATTAAAACAATATCCCACGTTGAGAGTAGAACTAGGAAGTGCCGCTGTTGAATCATTGGAGAGAATGAGAGAAGAAAGTAAGAAAGCAACTCTGCTATTGGTAGACATGGAAAGTGGTTATTTGACAGTTGAATTTTTTCGTAAACTTCCTCAAGACCCAGAGAAGGGTGGAAATCCAACTCACTCTCTATTTGACAGATACAATGATGCTTATCTTCGTCGAATTGCTACAACAGTGTTGTCCTATGTGAACATGGTATGTGGGGGGCTGAGGCATACTATTCCAAAATCTGTAGTATATTGCCAAGTGCGTGAGGCTAAGCGAAGCTTACTTGATCATTTCTTTGCAGAGATGGGAAAAAAAGAGGGAAAACAACTAGCTTCGTTACTGAATGAGGATCCAGCAATAATGCAGCGCAGGACCAACCTTTCAAAGAGGCTAGAGCTATACAGAAGTGCACAATCAGACATTGAGGCTGTAGCATGGGATAAGTAG 1869 0.4222 MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKIDEGREYGEFMHLPRKKFTDFAAVRQEIADETDRETGRARVVNLTLVDLPGLTKVAVEGQPDSIVQDIENMVRAFIEKMYEHLWYKLNFQSTTSLKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVDILEGKAYKLNYPWIGVVNRSQADINKNVDMIAARRRENEYFASTPEYRHLTSRMGSVHLGKVLSKHLETVIKSRIPGLQSLISKTIIDLESELNRIGKPIAADTGGKLYLVMEICRNFDQIFKDHLDGIKPGGEKIYQVFDNQFPAALKRLQFDKHLSLDTVRKLITEADGYQPHLIAPEKGYRRLIESCLVSIRGPAEAAVDTVHGILKDLIQKSMNETVASRKLLIVLTELKQYPTLRVELGSAAVESLERMREESKKATLLLVDMESGYLTVEFFRKLPQDPEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGGLRHTIPKSVVYCQVREAKRSLLDHFFAEMGKKEGKQLASLLNEDPAIMQRRTNLSKRLELYRSAQSDIEAVAWDK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0640 622 PANTHER DYNAMIN-RELATED PROTEIN 1B 2 621 - -
Lal6g0640 622 ProSiteProfiles GED domain profile. 530 622 IPR020850 -
Lal6g0640 622 PANTHER DYNAMIN 2 621 IPR022812 -
Lal6g0640 622 Pfam Dynamin family 37 215 IPR045063 -
Lal6g0640 622 SMART dynamin_3 1 253 IPR001401 GO:0003924|GO:0005525
Lal6g0640 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 310 IPR027417 -
Lal6g0640 622 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 302 IPR030381 GO:0005525
Lal6g0640 622 Pfam Dynamin GTPase effector domain 526 618 IPR003130 GO:0003924|GO:0005525
Lal6g0640 622 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Lal6g0640 622 Gene3D Dynamin, middle domain 333 598 - -
Lal6g0640 622 SMART GED_2 525 618 IPR003130 GO:0003924|GO:0005525
Lal6g0640 622 Gene3D - 1 311 IPR027417 -
Lal6g0640 622 Pfam Dynamin central region 223 500 IPR000375 -
Lal6g0640 622 PRINTS Dynamin signature 34 52 IPR022812 -
Lal6g0640 622 PRINTS Dynamin signature 59 76 IPR022812 -
Lal6g0640 622 PRINTS Dynamin signature 184 202 IPR022812 -
Lal6g0640 622 PRINTS Dynamin signature 203 219 IPR022812 -
Lal6g0640 622 PRINTS Dynamin signature 226 245 IPR022812 -
Lal6g0640 622 CDD DLP_1 34 302 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0640 Lal-Chr6 4166882 4173548 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0640 - - gmx:100793097 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0640 6 4166882 4173548 Lal6g0640 6 4166882 4173548 ECH
Lal6g0640 6 4166882 4173548 Lal22g0578 22 3954367 4017558 LSH