Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0578 ATGGAGAATTTGATACAGTTGGTGAACAAAATACAGAGAGCATGCACCGCTCTTGGTGATCACGGTGAAGAATCCGCATTGCCCACTCTCTGGGACGCTCTTCCCTCCATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAATCTTCAGTTTTGGAGAGTATTGTTGGAAAGGACTTTTTACCTCGTGGATCTGGGATTGTTACACGGCGTCCTCTTGTTTTGCAACTTCATAAGATTGATGAAGAGCGAGAATATGCTGAATTTATGCACCTTCCAAAGAAGAAATTCCCTGATTTTGCTACTGTTAGGCAGGAGATCGCCGATGAGACCGATAGAGAAACAGGACGCTCCAAGGGCATTTCTTCAGTTCCCATCCATCTCAGTATCTACTCCCCTCATGTTGTAAATCTTACACTGGTTGATCTTCCAGGACTTACAAAAGTTGCAGTCGAGGGTCAACCTGATAGCATTGTGCAAGACATCGAAAATATGGTTCGGGCCTTTATCGAAAAGCCAAATTGCATTATTTTGGCAATATCTCCTGCCAATCAAGATATTGCTACCTCAGATGCAATTAAGATTTCCCGTGAAGTGGACCCTAAAGGTGAAAGGACATTTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCAGTTGATATGCTTGAAGGGAGAGCATATAAGCTAAATTTCCCTTGGATTGGTGTTGTTAACCGCTCTCAAGCTGATATCAATAAAAATGTTGATATGATTGCTGCTCGGCGTAGAGAGAATGAATATTTTGCTAGCACACCAGAATATAGACATCTTGCTAGCAGAATGGGCTCTGTGCATCTGGGAAAGGTGCTATCTAAGCATTTGGAATCTGTCATCAAGTCTCGGATACCTAGCCTTCAGTCACTTATTGGCAAGACTATCATTGACTTGGAGTCCGAACTTAGCCGAATTGGGAAACCTATTGCTGCTGATACTGGAGGAAAGTTGTACATGGTAATGGAAATCTGTCGAACTTTCGATCAGATATTTAAAGATCATCTTGATGGCATACGGCCTGGTGGTGAGAAAATTTACCAAGTATTTGACAATCAATTCCCAGCAGCTCTAAAAAGGCTGCAGTTTGACAAACATCTATCATTGGACACTGTCCGAAAGCTAATAACTGAAGCAGATGGATATCAACCTCATCTCATCGCTCCCGAGCAAGGATATCGCCGCCTTATTGAATCTTGCTTAGTATCCATTAGGGGCCCTGCCGAAGCAGCTGTAGATACGGTTCATGGAATTTTGAAGGATCTGATTCAAAAGTCTATGAATGGGACAGTGGCAAGTAGCAAAGAATTAAAACAATATCCCACATTGAGAGTAGAACTTGGAAGTGCAGCTGTTGAATCATTGGAGAGGATGAGAGAAGAAAGTAAGAAAGCAACTCTGCTGTTAGTAGACATGGAAAGTGGTTATTTGACTGTCGATTTTTTTCGCAAACTTCCCCAAGACGCGGAGAAAGGAGGAAATCCAACTCACTCACTATTTGACAGATATAATGATGCTTATCTTCGTCGAATTGCTACCACTGTCTTGTCCTATGTGAACATGGTATGTGGGGGCCTGAGGCACACTATTCCCAAATCCGTAGTTTATTGCCAAGTGCGTGAGGCTAAACGCAGCTTACTTGATCATTTCTTTACAGAGCTTGGGAAAAAGGAGGGAGAACTTGCTGGGGAAATTGTTTTCAAATTAGATGAAAGCTACTTTCATTTGAGGGTATGCAAAACTATATTGAGTGCAAAAGCAATTAGTTACTATTTAAATTCTCGAAAGACATGCGGTCAGTTTTTTTCAGCTGAAATGAAGAACTTGCAGAACACAGAAGAATTACAGTCATCAACTCAAGCTTCTAATGAGCCCAAGTGTGAACAACCAAACAATCACACAACTGATGCCCCTGTGACAGACTCAGGTTCTGCATCTGCCTCAAGCAACGATAGCAAAAAGGTTTCACGGCAGGACATTGAGCTTGTCCAGAATTTAATCGAAAGGTGCCTACAATTATATATGAACAAAGATGAAGTGGTTAAAACACTACTGACTCGGGCAAAGATAGATCCTGGATTTACAACTCTTGGGATTTTGAGGAGAGAAGTGAGAAGACGGAGGAAGAGAGAAGACGAAGGAGAAGTGAGTCGTGAGTTCTCTCGGGCGATTCACCGCGGTGAGAAAGTGAGACTCGAAGGTGAGAAGACAAGGGAAAACGACGAACCCTACCCCTCATCTTCTCCTTTTCTATTTCGTGACGAGTTCTCCTCTTCCAGTGGCGGCCATGAACAGCTCGAGGTGGCGACAACTTCAATTCCTTATAGCTCCTCGGCGGAACCGTTCCTTTTCCACTCCGGCAGCAGCGACGGAATCATGTTTTTGTGGAGACTTCACGCTAAGGAACTGCAATGTGGCCACAGTGTTGACATCACTGATAATGAGTTGGCGTATTTAGAGAGCATCCATTTGTTTGTGGAAATATTGGATCACTTCTTCAGCAATGTGTGTGAACTGGATTTGGTCTTTAACTTCCACAAGGTCTATCTTATACTTGATGAATTCATTCTAGCGGGTGAACTGCAAGAAACCAGCAAGATGGCTAGCATTGAGAGAATGGGGGAACTGGAAAAATTAGATACCATGTTTACATATGCTTCTTACCTGGCTTGTGTTTATATAATGATGACATTCATAAAAATCAGTGGGTATCCTCATGTAATGCTTTTTGTTGATTTAGTATGGCAGAAGCTGGAAGAAGAGAATGATGATTTCTTCAGGGCCTACTATATCAGGCTAAAATTGAAAAAGCAAATACTTTTATTCAATCATTTGCTTGAGCATCAATATCATTTGATGAAGTGCCCCATGCCCGCTAAGGTTCCATTGGCTCCTATGCAGAATGGAATGCATCCGATGCCTGTCAACAACCTACCTATGGGATACCCAGTATTACAGCAGCAACCCATGTCAGCAGCAGGTCAGCCTCATATTGACTCCATGGGTTGTGGTATATCAATGGGTCACATGGCTAATGGAGTCCCTGCACCTACCAATTTTCATCCCATTCGGATGAGTTCTGGAAATGATATGGTGATGGACCACGGTGCTCCAGATATGGCTCATATTATGTCACCAATGTCAGATATGCCAGTGAGTCCGACATCAGTAGCACCCAGTGGCCATTTCCCCTTCACTGCATCAGAAATACCAGGAATGGGGGCAGACGTATCAGCTCTTGAAGCAGCATTTACATCTGATGTGGTAAGTTCAGTAGGACTACAGCTTGCACCGGATGGCAGCAATGGCATTTCTAGATCGCTAGATCAAATTCCGTGGAATTTCAGCCTATCTGATCTAGCAGCAGATTTGCCAAACTTAGGAGATCTAGGAGCTCTAGGAAATTATTATGGTTCACCATTTTTGCCATCTGATTCAGACATTTTACTTGAATCTCCCGATCAACATGATATAGGGTATAGCGAAGAGACATCACTGGTCGTTGACCAACTCTCCACATTTAAATTTAATTTAAAAGAGATAATTATATTATTTTATAAAACTAAAATTGATAGTAAAGAGACGAGACAAGAAATTTTAAGAAGTGAAGGTTTCACCATAATCTCCAAGTGA 3672 0.4248 MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKIDEEREYAEFMHLPKKKFPDFATVRQEIADETDRETGRSKGISSVPIHLSIYSPHVVNLTLVDLPGLTKVAVEGQPDSIVQDIENMVRAFIEKPNCIILAISPANQDIATSDAIKISREVDPKGERTFGVLTKIDLMDKGTDAVDMLEGRAYKLNFPWIGVVNRSQADINKNVDMIAARRRENEYFASTPEYRHLASRMGSVHLGKVLSKHLESVIKSRIPSLQSLIGKTIIDLESELSRIGKPIAADTGGKLYMVMEICRTFDQIFKDHLDGIRPGGEKIYQVFDNQFPAALKRLQFDKHLSLDTVRKLITEADGYQPHLIAPEQGYRRLIESCLVSIRGPAEAAVDTVHGILKDLIQKSMNGTVASSKELKQYPTLRVELGSAAVESLERMREESKKATLLLVDMESGYLTVDFFRKLPQDAEKGGNPTHSLFDRYNDAYLRRIATTVLSYVNMVCGGLRHTIPKSVVYCQVREAKRSLLDHFFTELGKKEGELAGEIVFKLDESYFHLRVCKTILSAKAISYYLNSRKTCGQFFSAEMKNLQNTEELQSSTQASNEPKCEQPNNHTTDAPVTDSGSASASSNDSKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLGILRREVRRRRKREDEGEVSREFSRAIHRGEKVRLEGEKTRENDEPYPSSSPFLFRDEFSSSSGGHEQLEVATTSIPYSSSAEPFLFHSGSSDGIMFLWRLHAKELQCGHSVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKMASIERMGELEKLDTMFTYASYLACVYIMMTFIKISGYPHVMLFVDLVWQKLEEENDDFFRAYYIRLKLKKQILLFNHLLEHQYHLMKCPMPAKVPLAPMQNGMHPMPVNNLPMGYPVLQQQPMSAAGQPHIDSMGCGISMGHMANGVPAPTNFHPIRMSSGNDMVMDHGAPDMAHIMSPMSDMPVSPTSVAPSGHFPFTASEIPGMGADVSALEAAFTSDVVSSVGLQLAPDGSNGISRSLDQIPWNFSLSDLAADLPNLGDLGALGNYYGSPFLPSDSDILLESPDQHDIGYSEETSLVVDQLSTFKFNLKEIIILFYKTKIDSKETRQEILRSEGFTIISK 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0578 1223 MobiDBLite consensus disorder prediction 625 667 - -
Lal22g0578 1223 CDD DLP_1 34 299 IPR001401 GO:0003924|GO:0005525
Lal22g0578 1223 PANTHER DYNAMIN 2 576 IPR022812 -
Lal22g0578 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 307 IPR027417 -
Lal22g0578 1223 PANTHER DYNAMIN-RELATED PROTEIN 1B 2 576 - -
Lal22g0578 1223 MobiDBLite consensus disorder prediction 625 666 - -
Lal22g0578 1223 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 673 710 IPR006476 -
Lal22g0578 1223 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Lal22g0578 1223 Pfam Plant protein 1589 of unknown function (A_thal_3526) 676 709 IPR006476 -
Lal22g0578 1223 SMART dynamin_3 1 250 IPR001401 GO:0003924|GO:0005525
Lal22g0578 1223 Gene3D - 769 900 - -
Lal22g0578 1223 Gene3D Dynamin, middle domain 325 574 - -
Lal22g0578 1223 Pfam Dynamin central region 220 491 IPR000375 -
Lal22g0578 1223 Pfam Dynamin GTPase effector domain 517 571 IPR003130 GO:0003924|GO:0005525
Lal22g0578 1223 Pfam Clathrin adaptor complex small chain 821 891 IPR022775 -
Lal22g0578 1223 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 299 IPR030381 GO:0005525
Lal22g0578 1223 Pfam Dynamin family 37 212 IPR045063 -
Lal22g0578 1223 PRINTS Dynamin signature 34 52 IPR022812 -
Lal22g0578 1223 PRINTS Dynamin signature 59 76 IPR022812 -
Lal22g0578 1223 PRINTS Dynamin signature 131 148 IPR022812 -
Lal22g0578 1223 PRINTS Dynamin signature 181 199 IPR022812 -
Lal22g0578 1223 PRINTS Dynamin signature 200 216 IPR022812 -
Lal22g0578 1223 PRINTS Dynamin signature 223 242 IPR022812 -
Lal22g0578 1223 SMART GED_2 516 599 IPR003130 GO:0003924|GO:0005525
Lal22g0578 1223 Gene3D - 1 308 IPR027417 -
Lal22g0578 1223 SUPERFAMILY SNARE-like 803 879 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0578 Lal-Chr22 3954367 4017558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0578 - - gmx:100793097 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0578 22 3954367 4017558 Lal22g0578 22 3954367 4017558 ECH
Lal6g0640 6 4166882 4173548 Lal22g0578 22 3954367 4017558 LSH