Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0537 ATGTGCATCACCCAAGTAATGTCCCTAATGGAGTTTCTCACTACTACCAAGTTTCACATGTCTTTTCTTGTTATTCTATCTATAGCTACAACAATACTTAACCCTGTATTTGCAACAAAAGCTTGTAATTTCCCAGCCATCTTCAACTTAGGTGACTCAAACTCAGATACTGGTGGCTTGGCTGCTTCACTTTTAGCACCAACCCCACCAAATGGAGAGACATATTTTCACAGACCCTCTGGAAGATTCTCTGATGGCCGTCTCATCATTGATTTTATTGCACAAAGTTTTGGACTACCCTATCTCAGTGCATATCTTGATTCCCTTGGGACTAACTTCTCACATGGTGCAAACTTTGCAACATCAGCTTCAACAATTAGACCCCCTCCCAGTATCATACCTCAGGGTGGGTATAGTCCTTTCTACCTTGATGTTCAGTACACTCAATTCAAAGATTTCAAACCTAGAACACAGTTTATTAGACATCAAGGTGGCATATTTGCAAGCTTGATGCCTAGAGAAGAGTATTTTCCTAAAGCTTTGTATACATTTGATATTGGTCAAAATGATCTTGGAGCTGGCTTTTTTGGTAACATGACTACTCAACAAGTTAATGCTTCTGTACCTGATATAGTCAACAGTTTCTCAGCAAATGTTAAGAACATATACAATTCGGGGGCTAGATCATTTTGGATACACAACACAGGACCCATTGGCTGCCTCCCTTATATTTTAGCCAACTTTCCATCAGTTGAAAGGGATGAATATGGTTGTGCAAAACCATATAATGAAGTAGCTCAGTATTTTAACAAAAAGTTGAAAGAAGCTCTGGTTCAACTTCGCAAGGATCTTCCTCTGTCTGCAATTACATATGTAGATATCTACTCAGTAAAGTACTCTCTTTACATCAACCCAAAGAAATATGGATTTGAGCAGCCACTTGTTGCATGTTGTGGCTATGGAGGGGAGTATAACTATAGCAGCATTGTTGGCTGTGGAGGAACCATAGAAATCAATGGTACTAATGTTTTTGTAGGTTCATGTGATAGACCATCTATTAGAGTGAATTGGGATGGAGTTCACTACACTGAAGCAGCTAGCAAGTTCATTTTTGATAAAATCTCCACTGGGGCTTTCTCAGATCCACCTCTTCCCTTGAACATGGCATGTCACAGAAATTCCACTAAAATCTGA 1194 0.3945 MCITQVMSLMEFLTTTKFHMSFLVILSIATTILNPVFATKACNFPAIFNLGDSNSDTGGLAASLLAPTPPNGETYFHRPSGRFSDGRLIIDFIAQSFGLPYLSAYLDSLGTNFSHGANFATSASTIRPPPSIIPQGGYSPFYLDVQYTQFKDFKPRTQFIRHQGGIFASLMPREEYFPKALYTFDIGQNDLGAGFFGNMTTQQVNASVPDIVNSFSANVKNIYNSGARSFWIHNTGPIGCLPYILANFPSVERDEYGCAKPYNEVAQYFNKKLKEALVQLRKDLPLSAITYVDIYSVKYSLYINPKKYGFEQPLVACCGYGGEYNYSSIVGCGGTIEINGTNVFVGSCDRPSIRVNWDGVHYTEAASKFIFDKISTGAFSDPPLPLNMACHRNSTKI 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0537 397 Pfam GDSL-like Lipase/Acylhydrolase 47 374 IPR001087 GO:0016788
Lal6g0537 397 CDD SGNH_plant_lipase_like 45 377 IPR035669 -
Lal6g0537 397 PANTHER ESTERASE-LIKE ISOFORM X1 20 393 - -
Lal6g0537 397 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 20 393 - -
Lal6g0537 397 Gene3D SGNH hydrolase 36 377 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0537 Lal-Chr6 3451339 3453615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0537 45 394 Acyl Lipid Metabolism Gene Families AT4G10950 26.923 5.28e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0537 - - gmx:100779094 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0537 6 3451339 3453615 Lal6g0537 6 3451339 3453615 ECH
Lal22g0485 22 3208285 3210982 Lal6g0537 6 3451339 3453615 LSH