Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0485 ATGGAGTTTTCTATGACTGCAAAGTTTCACATCTCATGTGTGTATTTTTTGGTGCTTTTATCGGTTGCTACATCAAAGTTGAACCCTTGTGATTTCCCAGCCATATTTAATTTCGGTGCATCAAACTCAGACACTGGTGGCTTCTCTGCTGCTCTTAGGTCATTGAAGTCACCATTTGGAGAAACCTATTTTCATAGACCTGCCGGAAGATTCTCTGATGGTCGCATCATTCTTGATTTCATAGCGGAAAGTTATGGACTTCCCTATGTGAGTGCTTACCTCGATTCTCTTGGAACCAATTTCTCACATGGAGCAAACTTAGCAACTGGGGGTTCAACAATTCTCCCCCCTGGACAAAATCCTCTAAGTCCTTTCTACCTTCATCTACAGTACTCTCAATTCATGAATTTCATACTCAAGACACAATACGTAAGACAACGAGGAGGCATATTTGCAACCTTGATGCCCCAACAAGAGTATTTTTCTAAAGCTTTATACACATTTGATATTGGTCAAAATGATCTCACAACTGCAATTTTTGGTAATATGACTATAGAGCAAGTGAAAGCTTCTGTACCTGATATTGTCAAGAGTTTCTCCAAAAATGTTAAGAACATATACAATTTGGGGGCTAGATCATTTTGGATACACAACACAGGTCCCCTTGGTTGCTTCTCTTCATTTTTGACCAAATTCCCATCTGCTGAGAAGGATGAGTATGGTTGTGCAAAGGCATATAATGAAGCAGCTCAATATTTCAATCAGAAATTGAAGGAATCATTAGCTCAATTTCGCATCGAATTTCTTGATGCAGCAATAACATATGTAGATATCTATTCTGCTAAGCTCTCTCTTTTCCAAGACCCAAAGAAATATGGATTTGAACGGCCACATGTTGCTTGCTGTGGCTATGGAGGAGAGTACAACTTCAACAATAATGGTGGATATTGTGGGACAACCATAAATGTAAATGGGACTAACATTTTAGTGGGTTCATGTAAAAACCCTTCTGATAGAATACTTTGGGATGGGATACATTATACTGAGGCAGCTAATAAGGTTGTCTTTGATAAAATCTCTAGTGGGGCTTTCTCAGATCCACCTGTCCCCTTGAATATGACATGTCATAGAAGTTTCACGAAAAACTGA 1149 0.3899 MEFSMTAKFHISCVYFLVLLSVATSKLNPCDFPAIFNFGASNSDTGGFSAALRSLKSPFGETYFHRPAGRFSDGRIILDFIAESYGLPYVSAYLDSLGTNFSHGANLATGGSTILPPGQNPLSPFYLHLQYSQFMNFILKTQYVRQRGGIFATLMPQQEYFSKALYTFDIGQNDLTTAIFGNMTIEQVKASVPDIVKSFSKNVKNIYNLGARSFWIHNTGPLGCFSSFLTKFPSAEKDEYGCAKAYNEAAQYFNQKLKESLAQFRIEFLDAAITYVDIYSAKLSLFQDPKKYGFERPHVACCGYGGEYNFNNNGGYCGTTINVNGTNILVGSCKNPSDRILWDGIHYTEAANKVVFDKISSGAFSDPPVPLNMTCHRSFTKN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0485 382 SUPERFAMILY SGNH hydrolase 105 359 - -
Lal22g0485 382 Pfam GDSL-like Lipase/Acylhydrolase 35 359 IPR001087 GO:0016788
Lal22g0485 382 Gene3D SGNH hydrolase 23 363 IPR036514 -
Lal22g0485 382 CDD SGNH_plant_lipase_like 33 362 IPR035669 -
Lal22g0485 382 PANTHER ESTERASE-LIKE ISOFORM X1 11 378 - -
Lal22g0485 382 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 11 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0485 Lal-Chr22 3208285 3210982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0485 33 373 Acyl Lipid Metabolism Gene Families AT4G10950 25.852 1.05e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0485 - - gmx:100818460 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0485 22 3208285 3210982 Lal22g0485 22 3208285 3210982 ECH
Lal22g0485 22 3208285 3210982 Lal6g0537 6 3451339 3453615 LSH