Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0534 ATGGAGTTTCCTCTTCACATCTCACTTGTGTCTTTTCTGGTGCTTTTATCCATTGTAAACCCAATATTTGCCACAAAAGTTTGTAATTTCCCTGCTATATTTAATTTTGGTGCCTCAAATGCTGATACCGGTGGTTTCGCTGCTTCCTTTGGAGGAATGACATCACCATATGGAGAGACATTTTTTCACAGACCCGCCGGAAGGTTCTCTGATGGCCGTATCATTCTTGATTTCATAGCACAAAATTTTGGACTCCCCTATGTAAGTGCATATCTTGATTCTCTAGGGACCAATTTCTCTCACGGAGCAAACTTTGCAACAGCAGGATCTACAATTAAACCCCCATCTACTTATCCGGTTAGTTTTACAACTAGTGTTAGATTCAGTCCTTTCTACCTTGATGTACAATACTCTCAGTTCAAGAGTTTCATACCCAAGACCAAATTCATTAGAAAGCAAGGAGGCATATTTGCAAACTCGATGCCTAATGAAAAGTATTTCTCTGAAGCTCTATACACATATGATATTGGTCAAAATGATATCACTGCTGGCTTTTTTAGTAATAAGACAGTGCAACAAGTTAATGCTACTATACCTGATATAGTCAATAATTTCTCAGCACATCTTAAGAAAATATTCGATTTGGGAGGTAGATCATTTTGGATACACAACACAGGACCTATTGGGTGCCTCCCTTTGATTTTGGGCAGTTTTCCATCAACTGAAAAAGATGAATATGGTTGTGCCAAAGAACATAATGAAGTATCTCAGTATCTCAACTACAGATTGAAAGAAAGTTTAGCTCAACTTCGCAAGGACCTTCCTGATATAGCAATAACATATGTAGATATCTACTCTGCTAAGTTCTCTCTTTTCCAAGACCCAAAGAAATATGGATTTGAGAAGCCAAATGTTGCATGTTGTGGGTATGGAGGGGAGTACAACTACAACGTTAATGTTCCATGTGGGTCAGCCATAAACACAAATGGCACTGAAAAATTAGTGGGTTCATGTGAAAAACCTAGTGATAGAATTGTTTGGGATGGGATACATTACACAGAGGCAGCTAACAAGTTTGTCTTCTGTAAAATTGCTACTGGAGCTTTCAATGATCCACCTGTCCCATTGAATATGGCATGCCACAGAAGTTTCACTAAAAAATTGTTAGTTTGA 1173 0.3828 MEFPLHISLVSFLVLLSIVNPIFATKVCNFPAIFNFGASNADTGGFAASFGGMTSPYGETFFHRPAGRFSDGRIILDFIAQNFGLPYVSAYLDSLGTNFSHGANFATAGSTIKPPSTYPVSFTTSVRFSPFYLDVQYSQFKSFIPKTKFIRKQGGIFANSMPNEKYFSEALYTYDIGQNDITAGFFSNKTVQQVNATIPDIVNNFSAHLKKIFDLGGRSFWIHNTGPIGCLPLILGSFPSTEKDEYGCAKEHNEVSQYLNYRLKESLAQLRKDLPDIAITYVDIYSAKFSLFQDPKKYGFEKPNVACCGYGGEYNYNVNVPCGSAINTNGTEKLVGSCEKPSDRIVWDGIHYTEAANKFVFCKIATGAFNDPPVPLNMACHRSFTKKLLV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0534 390 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 384 - -
Lal6g0534 390 Pfam GDSL-like Lipase/Acylhydrolase 33 361 IPR001087 GO:0016788
Lal6g0534 390 Gene3D SGNH hydrolase 23 367 IPR036514 -
Lal6g0534 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 5 384 - -
Lal6g0534 390 CDD SGNH_plant_lipase_like 31 367 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0534 Lal-Chr6 3432183 3435797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0534 31 378 Acyl Lipid Metabolism Gene Families AT4G10950 27.855 3.29e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0534 - - cam:101514585 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0534 6 3432183 3435797 Lal6g0534 6 3432183 3435797 ECH
Lal22g0484 22 3204536 3206813 Lal6g0534 6 3432183 3435797 LSH