Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0484 ATGGAGTGTCCCAGGAATACAAAGTTTCATATCCCATTTGTTTTTTTCTTTATGATTTCATTGGTTGTCACTACAATATCGAATCCTGTATTTGCGAAAGGACCTTGTAATTTCCCAGCCATATTTAACTTTGGTGCCTCAAACTCTGATACTGGTGGCTACTCAGTTTCCATGAAGGCACTGAAGCCACCATATGGAGAAACTTATTTCCATAGACCAGCAGGAAGATATTCTGATGGCCGTATCATTCTTGATTTCATAGCACAAAATTTTGGACTCCCTTATCTCAGCCCTTACCTTGATTCTCTAGGATCTAATTTCTCAACTGGTGCAAACTTCGGAACAGCAGGATCAACAATCCAACCACAATCTAGTTATTTAGTTGTTGGTTATGTATTCAGTCCTTTCTCCTTAGACGTGCAGTACAATCAATTCATAAATTTCATACCTAGAACAAAATTCTTCAGAGAACAAGGAGGCATATTTGCAACCTTGATGCCACAAGAAGAGTATTTTTCTAAAGCCTTATACACATTTGATATTGGTCAAAATGATCTTACTGCTAGCTTATTTAGTTTGAGGCCTATAAAGCAAATTAAAGATTCTATACCAGATACAATGAAGAAATTCACAGCAAATGTTAAGAACATATACAATTTGGGTGGAAGATCATTTTGGATACACAGCACAGGGCCCCTTGGATGCCACTCTTCATTTTTGTCTTATAATCCGTTTGGTGAAAGGGATGAGTATGGTTGTATAAAGGAAATAAATGAAATATGTAAATACTTCAACTTAAATCTTAAAGAAGCCTTAGCTCAACTTCGCAAGGATCTTCCTAATGCAGCAATAACTTATGTAGATATTTATTCTGCCAAGTACTCTCTTTTCCAAGACCCAAAGAAATATGGATTTGAGGACCCACAAGTTGCATGTTGTGGCTATGGAGGGAAGTACAACTTTAACCTTATGGTTGAATGTGGGAACACTATGAAGATAAATGGTACTGAAATTTCAGCAGGTTCATGTGGAAAAGCTTCTGTTAGAGTTATGTGGGATGGGACACATTACACAGAAGCAGCAAATAAAGTGATATTTGATAAAATTTCTAGTGGGGCTTTCACAGATCCACCTATACCTTTGAATATGGCATGTCTCAGAAGTTTAGATACATAA 1176 0.3673 MECPRNTKFHIPFVFFFMISLVVTTISNPVFAKGPCNFPAIFNFGASNSDTGGYSVSMKALKPPYGETYFHRPAGRYSDGRIILDFIAQNFGLPYLSPYLDSLGSNFSTGANFGTAGSTIQPQSSYLVVGYVFSPFSLDVQYNQFINFIPRTKFFREQGGIFATLMPQEEYFSKALYTFDIGQNDLTASLFSLRPIKQIKDSIPDTMKKFTANVKNIYNLGGRSFWIHSTGPLGCHSSFLSYNPFGERDEYGCIKEINEICKYFNLNLKEALAQLRKDLPNAAITYVDIYSAKYSLFQDPKKYGFEDPQVACCGYGGKYNFNLMVECGNTMKINGTEISAGSCGKASVRVMWDGTHYTEAANKVIFDKISSGAFTDPPIPLNMACLRSLDT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0484 391 CDD SGNH_plant_lipase_like 39 372 IPR035669 -
Lal22g0484 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 19 388 - -
Lal22g0484 391 Gene3D SGNH hydrolase 30 373 IPR036514 -
Lal22g0484 391 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 19 388 - -
Lal22g0484 391 Pfam GDSL-like Lipase/Acylhydrolase 41 369 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0484 Lal-Chr22 3204536 3206813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0484 39 386 Acyl Lipid Metabolism Gene Families AT4G10950 26.039 8.19e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0484 - - gmx:100818460 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0484 22 3204536 3206813 Lal22g0484 22 3204536 3206813 ECH
Lal22g0484 22 3204536 3206813 Lal6g0534 6 3432183 3435797 LSH