Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0516 ATGAAGATGGATATGAACACTCCTATGTTGTTGTTCTTATGGTTCACCATTCTTTGTGTTGTGCTCCCTCAAACACATGCACTTTGGATTGAAATACCGAGTTCAGGACCTAAGTGTATCTCTGAGGAAATCCACTCAAATGTTGTCGTTTTAGGTGATTACTTTCTTTTTAGTGATCATAAGAATACCGAACATATCACCCTTAGTAGCACGGTGACTAGTCCTTATGGAAATACCCTTCACCACCTCGAAAATGCTACACATGGTCAGTTTGCATTTACAACTGCGGAGACTGGGACCTATACGGCATGCTTTAAGCTAGTGGGAAGTAATATACCAGCAGGGGGTCAAAATCTCATTCTTGATTGGAAAATTGGAATTAATGCCAAGGATTGGGATTCTGTTGCAAAGAAAGAAAAAATTGAGGGTGTTGAACTTGAGATAAAGAAACTTGAAGAATCAGTTGATATCATTCATCAGTTTCTAGGTTATATGAAGGAAAAGGAAACAAATATGATGGAAGCCAGTGAAAAAACATATGCTAAAGTGGCTCATTATACTTACATATCTCTCGGTGTCTGCATTTCCGTTGCGGCGTTGCAGGTGTGGCACCTGAAACGCTTCTTTCAGAAGAAGAAGCTTATATAG 648 0.3935 MKMDMNTPMLLFLWFTILCVVLPQTHALWIEIPSSGPKCISEEIHSNVVVLGDYFLFSDHKNTEHITLSSTVTSPYGNTLHHLENATHGQFAFTTAETGTYTACFKLVGSNIPAGGQNLILDWKIGINAKDWDSVAKKEKIEGVELEIKKLEESVDIIHQFLGYMKEKETNMMEASEKTYAKVAHYTYISLGVCISVAALQVWHLKRFFQKKKLI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0516 215 ProSiteProfiles GOLD domain profile. 37 150 IPR009038 -
Lal6g0516 215 SMART EMP24_GP25L_2 27 210 IPR009038 -
Lal6g0516 215 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 8 215 IPR015720 -
Lal6g0516 215 Pfam emp24/gp25L/p24 family/GOLD 27 210 IPR009038 -
Lal6g0516 215 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 8 215 - -
Lal6g0516 215 Coils Coil 134 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0516 Lal-Chr6 3301165 3303684 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0516 K20352 - vvi:100256716 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0516 6 3301165 3303684 Lal6g0516 6 3301165 3303684 ECH
Lal22g0478 22 3165373 3166526 Lal6g0516 6 3301165 3303684 LSH