Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0478 ATGAATCCTCTGATGTTGTTCTTATGCTTCACCACCTTTTCTCTTTTGTTGTTCCCTCAAGCAAACGCCGTTTGGATAGAAATACCGGGTTCCGGAACCAAGTGTGTCTCTGAGGAAATTCATACAAACGTTGTCGTTTTAGCCGAGTACTATCTTTTCACTCATCATGAGGCTATGACTGTTACTGCCAAGGTAACTAGTCCTTATGGAAACACTCTTCACTATAATGAAAATGTTATACATGGTCAGTTTGCATTTACAACTACCGAAACTGGGAGTTATCCAATCTTTTCTTACCTCAATCTTTTCTTCCTTAAACCAAGATGGGAAGCAAAAATGAGGGAAGTTGGTGAAAGAACAAATGCTAGAGTCGCTTGGTATGGATTCATGTCTCTCGGTGTTTGCATTTTGGGTGCGGCGTTGCAGGTGTGGCACCTGAAGCGCTTCTTTCATAAGAAGAAACTCATATAG 471 0.4119 MNPLMLFLCFTTFSLLLFPQANAVWIEIPGSGTKCVSEEIHTNVVVLAEYYLFTHHEAMTVTAKVTSPYGNTLHYNENVIHGQFAFTTTETGSYPIFSYLNLFFLKPRWEAKMREVGERTNARVAWYGFMSLGVCILGAALQVWHLKRFFHKKKLI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0478 156 SMART EMP24_GP25L_2 23 151 IPR009038 -
Lal22g0478 156 Pfam emp24/gp25L/p24 family/GOLD 24 94 IPR009038 -
Lal22g0478 156 Pfam emp24/gp25L/p24 family/GOLD 110 150 IPR009038 -
Lal22g0478 156 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 94 IPR015720 -
Lal22g0478 156 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 101 156 IPR015720 -
Lal22g0478 156 ProSiteProfiles GOLD domain profile. 33 136 IPR009038 -
Lal22g0478 156 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 4 94 - -
Lal22g0478 156 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 101 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0478 Lal-Chr22 3165373 3166526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0478 K20352 - gmx:100527637 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0478 22 3165373 3166526 Lal22g0478 22 3165373 3166526 ECH
Lal22g0478 22 3165373 3166526 Lal6g0516 6 3301165 3303684 LSH