Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0510 ATGGAGTTGCTAAGGGTACAAACCATCGCTTCCAAGTCCAAAAATGGTGCAATCCCAGCCATGTTTGTTAGGTCAGAGACAGAGCAACCAGGCATCACAACGGTTCATGGTGTTAAACTCGAGGTTCCCATAATTGATTTCAGCAACCCTGAAGAAGGGAAAGTCCTAAGTGAGATTATGGAAGCAAGTAAAGAATGGGGTATGTTCCAAATTGTGAACCATGAGATACCAAGCCATGTTATAAGCAAATTGCAAAGTGTTGGAAAAGAGTTCTTTGAGTTACCACAAGAAGAAAAGGAGCTATATGCTAAGCCTCTTGGGTCAGATTCATTACAAGGTTATGGCACAAAGCTTCAGAAAGAGGTGAACGAAAAAAAAGGTTGGGTGGATCACTTATTTCACATTATTTGGCCACCTTCCTCCATTAATTATCATTTCTGGCCTAAGAACCCTCCTTCTTACAGGGAGACAAATGATGAATACCTAAAGTACCTACATGGGGTGGTTGATAAACTATTCAAAAGCATGTCACTAGGGTTAGGGCTTGAAGAACATGAGCTAAAGAAAGCTGCAGGTGGAGATGACATAATTCACCTTTTGAAGATTAATTACTATCCACCTTGTCCATACCCTGATCTAGTTCTAGGTGTACCACCACATACTGACATGTCCTACATAACCATTCTGGTCCCTAATGAAGTGCAAGGCCTTCAAGCCTCCAGAGATGGCCACTGGTACGATGTTAACTATGTCCCCAATGCTCTTGTTATTCACATTGGTGACCAAATGGAGATACTGAGCAATGGGAAATATAAAGCTGTGTTACACAGAACAACAGTGAGCAAAGAAAAGACTAGAATTTCGTGGCCAGTATTCTTAGAGCCCCCACCCGAGTACGAAGTTGGTCCTCACCCAAAGTTGATTAACCAAGACAATCCTCCAAAATACAAGACCAAGAAATACAAAGATTATGCTTACTCTAAGCTCAACAAAATTCCTCAGTAA 1005 0.4139 MELLRVQTIASKSKNGAIPAMFVRSETEQPGITTVHGVKLEVPIIDFSNPEEGKVLSEIMEASKEWGMFQIVNHEIPSHVISKLQSVGKEFFELPQEEKELYAKPLGSDSLQGYGTKLQKEVNEKKGWVDHLFHIIWPPSSINYHFWPKNPPSYRETNDEYLKYLHGVVDKLFKSMSLGLGLEEHELKKAAGGDDIIHLLKINYYPPCPYPDLVLGVPPHTDMSYITILVPNEVQGLQASRDGHWYDVNYVPNALVIHIGDQMEILSNGKYKAVLHRTTVSKEKTRISWPVFLEPPPEYEVGPHPKLINQDNPPKYKTKKYKDYAYSKLNKIPQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0510 334 MobiDBLite consensus disorder prediction 300 319 - -
Lal6g0510 334 Gene3D - 2 332 IPR027443 -
Lal6g0510 334 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 4 331 - -
Lal6g0510 334 SUPERFAMILY Clavaminate synthase-like 12 332 - -
Lal6g0510 334 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 331 - -
Lal6g0510 334 Pfam 2OG-Fe(II) oxygenase superfamily 197 295 IPR044861 -
Lal6g0510 334 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 149 IPR026992 -
Lal6g0510 334 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 295 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0510 Lal-Chr6 3263699 3265180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0510 40 325 Glycosyltransferase AT5G59530 29.630 3.89e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0510 K05278 - gmx:778157 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0510 6 3263699 3265180 Lal6g0510 6 3263699 3265180 ECH
Lal22g0473 22 3136571 3139576 Lal6g0510 6 3263699 3265180 LSH