Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0473 ATGGAAGTGGAAAGAGTGCAAACCTTGGCTCTTGATGAACTCAAGGAGCTTCCATCACAATTCATTCGTGAAGCCAAGGAACAACCAGAAAATACCAAAGCCATGGAAGGTATCAATGTGCCTGTAATCTCATTATCTCAACCACACCAAATTTTGGTTAAGGAAATTACCCAAGTTGCTTCAGAATGGGGATTCTTCCTCCTAACCGATCATGGTATATCTCCAACATTGATCCAACGTTTGCAAGAGGTGGGTCATGAGTTTTTTTCCCTTCCTCAAATGGACAAAGAGGCATATGCAAATGACCCATCCATGGGTAGGTTTGAGGGCTATGGCACCAAAATGACAAAGAACTTTGAAGAAAAATTGGAGTGGGTTGATTATTATTTTCATCTTATGTCTCCTCTTTCTAGGGTTAACTATGATATGTGGCCCAAGAACCCTGCTTCCTACAGGGAAATCACAGAAGATTACAGTAAGGAGATGTTAAGGGTAACTGACAAAGTGTTGGATCTTCTATCAGAGGGTCTAGGGTTAGAGACTAAGGTTTTAAAGTGTAGCTTGGGAAATGAAGAAATAGAACTTGAAATGAAGATAAATATGTATCCACCATGTCCACAACCAGAACTAGCATTAGGAGTTGAACCTCACACTGATATGTGTGCCCTTACTCTACTCATCCCAAACGATGTTCCAGGCCTTCAAGTTTGGAAAGACAATAATTGGGTTGCTGTCAACTACTTGCATAATGCACTCTTCGTACATGTTGGTGATCAACTTGAGGTTCTGAGCAATGGGAAGTACAAGAGTGTTCTCCACAGAAGCTTGGTGAATAAGGAACGTATGCGCATGTCTTGGGCAGTGTTTGTTGTGCCACCACATGATACTGTAATTGGGCCTCTTCCTATGCTCCTCAACCATCAAAATCCATCCAAATTCTCAACAAAAACCTTTGCTGAGTACAGGCACCGCAAATTTAATAAGCTTCCACAATAG 996 0.4147 MEVERVQTLALDELKELPSQFIREAKEQPENTKAMEGINVPVISLSQPHQILVKEITQVASEWGFFLLTDHGISPTLIQRLQEVGHEFFSLPQMDKEAYANDPSMGRFEGYGTKMTKNFEEKLEWVDYYFHLMSPLSRVNYDMWPKNPASYREITEDYSKEMLRVTDKVLDLLSEGLGLETKVLKCSLGNEEIELEMKINMYPPCPQPELALGVEPHTDMCALTLLIPNDVPGLQVWKDNNWVAVNYLHNALFVHVGDQLEVLSNGKYKSVLHRSLVNKERMRMSWAVFVVPPHDTVIGPLPMLLNHQNPSKFSTKTFAEYRHRKFNKLPQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0473 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 292 IPR005123 -
Lal22g0473 331 SUPERFAMILY Clavaminate synthase-like 3 328 - -
Lal22g0473 331 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 331 - -
Lal22g0473 331 Pfam 2OG-Fe(II) oxygenase superfamily 199 290 IPR044861 -
Lal22g0473 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 145 IPR026992 -
Lal22g0473 331 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE-LIKE 3 331 - -
Lal22g0473 331 Gene3D - 1 329 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0473 Lal-Chr22 3136571 3139576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0473 4 328 Glycosyltransferase AT5G59530 29.464 1.39e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0473 K05278 - gmx:100810937 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0473 22 3136571 3139576 Lal22g0473 22 3136571 3139576 ECH
Lal22g0473 22 3136571 3139576 Lal6g0510 6 3263699 3265180 LSH