Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0250 ATGGCGTGTTCACGACCTCCACCTTCCAAGTCCCTCGACCTTGACCTAAGCATCGTCTCCGCCAAGCACCTCAAAAACGTTAACTGGAAAAACGGTTCCCTCAAACCCTATGTCGTTTTCTGGGTCGACCCAGATCGCAGGCTCGCAACCAAATCCGACGATTCCGGATCAACCAAACCCGTTTGGAACGAGCGCTTCACCCTCCCACTCCCTCATCCTCTCCACGATGCCTTCCTCAATCTCGAGATCTTCCATTCCCTATCCTCTGATACTTCCAAACCCCTCGTCGCTTCCCTCCACCTCCCTCTAAAGGATATACACGACCTCACTGACCCGACCCGGATCCGAAAGTTTACTCTCAACCGCCCCTCTGGCCGCCCCCACGGCCAGATCTACCTCAAGCTTGGCCTCCTTGGCCGTCCGATCCAAACCCTAGATCATGTTAGTCCTAGCCCCTCCGTCCTCGGTTACGCGCAGCCAACACTGCCACCGCCTAATCCCATTGCTCCGTCGTCTTTGCGCGACTACAGAGGATTCTCACCGTCAATCTCACATTTACCATCTTATCCATCCTACTCTACCTACAGTTCATACTCTGATGCTTACTCTTCTTCTGGATACTACCCAGGGTATTATTCCGGTGCTCCCCCACCTCCTACTCCGTCAAGGCCTTTCCTTGATCGTCCTTTGGGCTATGGTTCCGGGCCCAGTGGGCCATCTGCTCCGATTGATTATTCGTCGTATGAGAAGCCCAGGAGTGCGAAGCTGGGTATGGGAACTGGGGCTGGGCTTGTAGTGGGTGCAGTTGCTGGAGCTGTGGGTGGACTTGCTTTGGAAGAAGGAGTGAACTATGAAGAAGAGAAAATTTCTGAGAGGGTTGAAAGTGCTGCTAACTTGGCTGCTGCACGAGATGATTACAGCGAGTATCGTGTTGATTATTAA 942 0.5318 MACSRPPPSKSLDLDLSIVSAKHLKNVNWKNGSLKPYVVFWVDPDRRLATKSDDSGSTKPVWNERFTLPLPHPLHDAFLNLEIFHSLSSDTSKPLVASLHLPLKDIHDLTDPTRIRKFTLNRPSGRPHGQIYLKLGLLGRPIQTLDHVSPSPSVLGYAQPTLPPPNPIAPSSLRDYRGFSPSISHLPSYPSYSTYSSYSDAYSSSGYYPGYYSGAPPPPTPSRPFLDRPLGYGSGPSGPSAPIDYSSYEKPRSAKLGMGTGAGLVVGAVAGAVGGLALEEGVNYEEEKISERVESAANLAAARDDYSEYRVDY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0250 313 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 138 IPR035892 -
Lal6g0250 313 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Lal6g0250 313 Pfam C2 domain 13 108 IPR000008 -
Lal6g0250 313 SMART C2_3c 13 115 IPR000008 -
Lal6g0250 313 Gene3D C2 domain 13 137 IPR035892 -
Lal6g0250 313 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 7 309 - -
Lal6g0250 313 PANTHER INGRESSION PROTEIN FIC1 7 309 - -
Lal6g0250 313 MobiDBLite consensus disorder prediction 218 246 - -
Lal6g0250 313 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0250 Lal-Chr6 1626626 1627567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0250 - - gmx:102666594 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0250 6 1626626 1627567 Lal18g1359 18 15966338 15967228 ECH
Lal6g0250 6 1626626 1627567 Lal6g0250 6 1626626 1627567 ECH