Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1359 ATGGCGTCTTCACGTCCTCCACCGTCCAAGTCCCTCGACCTTGATCTCACCATCGTCTCCGCCAAGCACCTCAAAAACGTCAACTGGAAAAACGGTTCTCTCAATCCCTACGTCGTTTTCTGGGTCCACCCAGATCGTAGACTCGCCACCAAATCCGACGATTCCGGTTCAACTAAACCCATCTGGAACGAACGGTTCACTCTCCCTCTCACTCACTCTCTCAACGATTCCTTCCTCACTCTTGAGATCTTCCATTCCAAACCCTCCGATACCCCAAAACCCCTCGTCGCTTCTCTCCGCCTCCCTCTTAAGGACATCGACGACCTTCATGACCCGACCCGGATCCGAAAATTTACACTCACCCGTCCATCTGGCCGTCCCCACGGTAAGATCCATCTCAAGCTTGGCCTTCTTGGCCGTCCGATTCAATCCATTGATTACGTCAGCCCAAGCTCCTCGGTCTTAGGTTACGCGCCTAATCCTATCGCTCCACCCTCTGCGCGCGACTACAGAGGATTCTTACCCTCTTCCCCACCGTATTCTACGTACAATTCGTACGGTTCATACCATGATGCTTACTCTGGATACTATCCAGGGTATTATTCCGGTGCTCCATTGCCTCCTCCTCCGTCGAGGCCCTTCCTCGATCGTCCGTTGGGCTATGCTGCTGGGCCCAGTGGGCCCTCTGCTCCGATAGATTACTCGTTGTACGAGAAGCATGCGAAGATGGGTATGGGGATTGGTACTGGGCTTGCAGTGGGTGCTGTTGCTGGAGCATTGGGTGGACTTGCTTTGGAAGAAGGGATGAACTATGAAGAGGAGAAAATTGCTGAGAGGGTTGAGAATGCTGCTGCACGAGATGATTACAGCGAGTACCGAGTTGATTATTAA 891 0.5275 MASSRPPPSKSLDLDLTIVSAKHLKNVNWKNGSLNPYVVFWVHPDRRLATKSDDSGSTKPIWNERFTLPLTHSLNDSFLTLEIFHSKPSDTPKPLVASLRLPLKDIDDLHDPTRIRKFTLTRPSGRPHGKIHLKLGLLGRPIQSIDYVSPSSSVLGYAPNPIAPPSARDYRGFLPSSPPYSTYNSYGSYHDAYSGYYPGYYSGAPLPPPPSRPFLDRPLGYAAGPSGPSAPIDYSLYEKHAKMGMGIGTGLAVGAVAGALGGLALEEGMNYEEEKIAERVENAAARDDYSEYRVDY 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1359 296 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 138 IPR035892 -
Lal18g1359 296 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Lal18g1359 296 Pfam C2 domain 13 108 IPR000008 -
Lal18g1359 296 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 7 292 - -
Lal18g1359 296 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
Lal18g1359 296 PANTHER INGRESSION PROTEIN FIC1 7 292 - -
Lal18g1359 296 SMART C2_3c 13 115 IPR000008 -
Lal18g1359 296 Gene3D C2 domain 4 138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1359 Lal-Chr18 15966338 15967228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1359 - - aip:107609433 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0250 6 1626626 1627567 Lal18g1359 18 15966338 15967228 ECH
Lal18g1359 18 15966338 15967228 Lal18g1359 18 15966338 15967228 ECH