Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0245 ATGTCATCCCTGAAGCAAGGTGAAGAAATCCCAATATCAAGCCATAACGAGACGTTTGAGCATGAAAACATAGAGGAGGAGAATGAAGGAGATTCACATTCGGGCTTCAAAAATTTTCTCTGGAATGGTGGGTCTGCTTATGATGCCTGGTTCAGCTGTGCTTCAAATCAGGTTGCTCAGGTTCTGTTAACACTACCAACTTCTTTCTCTCAGCTTGGAATGATTTCAGGCATCATATTACAAGTCTTCTATGGCATTCTGGGTAGTTGGACTGCTTATTTGATTAGCGTTTTGTACGTCGAGTACAGGAACCGAAAAGAGAAAGAGAATGTTAACTTCAAAAACCATGTCATTCAGTGGTTTGAAGTCTTGGAAGGTTTACTTGGTCCATACTGGAAAGCCATTGGATTAGCCTTCAATTGTACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGTGCCAGTAACATATACTACATAAATGATCACTTGAACAAGAGGACTTGGACTTACATATTTGGAGCATGCTGTGCCACCACAGTGTTCATACCCTCATTCCATAACTACAGGATTTGGTCATTCCTTGGCCTTGGCATGACCACATACACAGCTTGGTACTTAACCATTGCAGCCCTTGTTCATGGCCAGGTTGAAAATGTGACACACACAGGCCCAAACAAATTGGTATTGTATTTCACAGGTGCCACTAATATCCTCTACACTTTCGGTGGGCACGCTGTTACGGTGGAAATCATGCATGCAATGTGGAAACCTAGGAAGTTCAAATATATCTATCTTTATGCCACAATTTATGTATTCGGCCTCACCCTACCATCTGCTATCTCCGTCTATTGGGCCTTCGGTGACCAACTCTTAACTCAGTCCAATGCCTTTGCCCTTCTCCCTCGCTCTGGCTGGCGTGATGCTGCTGTAATCTTAATGCTCATTCATCAGTTTATCACGTTTGGATTTGCAAGTACACCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATAACACAAAGAGCATATTTCTGAGGGCTTTAGTGAGGTTGCCTGTGGTGATACCAATATGGTTTTTAGCTATTGTTTTCCCATTCTTTGGTCCCATTAACTCAGCTGTGGGGGCTCTTTTGGTTACCTTCACCGTCTATGCCATCCCTGCTGTTGCCCATATGCTCACTTTCAAGTCTGCTTCTGCTAGACAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACCTTAATGTATGTAATCAATGCAATTGTGGTGGTGTGGGTTTTAGTAGTAGGTCTTGGATTTGGAGGTTGGGCTAGCGTGACAAATTTCATAAGGCAGATTCACACATTTGGACTATTTGCACCGTGCTATCAGTGCCTGCCAAAAGGCCCACCTACCAACAGCACACTGCATCACTGA 1437 0.4342 MSSLKQGEEIPISSHNETFEHENIEEENEGDSHSGFKNFLWNGGSAYDAWFSCASNQVAQVLLTLPTSFSQLGMISGIILQVFYGILGSWTAYLISVLYVEYRNRKEKENVNFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLNKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVTHTGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPRKFKYIYLYATIYVFGLTLPSAISVYWAFGDQLLTQSNAFALLPRSGWRDAAVILMLIHQFITFGFASTPLYFVWEKVIGMHNTKSIFLRALVRLPVVIPIWFLAIVFPFFGPINSAVGALLVTFTVYAIPAVAHMLTFKSASARQNAAEKLPFFIPSWTLMYVINAIVVVWVLVVGLGFGGWASVTNFIRQIHTFGLFAPCYQCLPKGPPTNSTLHH 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0245 478 Pfam Transmembrane amino acid transporter protein 43 435 IPR013057 -
Lal6g0245 478 PANTHER AUXIN INFLUX TRANSPORTER 5 468 - -
Lal6g0245 478 PANTHER OS05G0424000 PROTEIN-RELATED 5 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0245 Lal-Chr6 1591444 1595098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0245 24 465 Organic Solute Cotransporters AT2G21050 76.629 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0245 K13946 - gmx:100817572 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0245 6 1591444 1595098 Lal18g1367 18 16028599 16033665 ECH
Lal6g0245 6 1591444 1595098 Lal6g0245 6 1591444 1595098 ECH
Lal18g1367 18 16028599 16033665 Lal6g0245 6 1591444 1595098 LSH
Lal22g0231 22 1437099 1441736 Lal6g0245 6 1591444 1595098 LSH
Lal18g1367 18 16028599 16033665 Lal6g0245 6 1591444 1595098 PCT
Lal6g0245 6 1591444 1595098 Lal18g1367 18 16028599 16033665 PCT