Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0231 ATGACACGAGATAATCTTTACTGGCTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGTACTGCCTCAAGGTGGAAGCAGACTATCAACCACGCCGTCCCCAGGATAAAACAGCCCAACTCTCTTGCCACGGAAAGAAAGGGAGAGAAGGAGGCCGGAAATACGTCGGCAGAAAATATTGAGGGAGAAAGAAAAGAGCAAGTTGCTCAGGTTTTGTTAAGACTGCCATGTACTTTCTCTCAGCTTGGTATGGTTTCAGGAATCATATTGCAAGTCTTCTATGGCATTCTTGGTTGTTGGACTGCTTATTTGATTAGCATTCTCTACATTGAGTACAGGACCCGAAAAGAGAGAGAAAATGTTACCTTCGAAAACCATGTCATTCAGTGGTATGAAGTGTTGGAAGGTTTACTTGGTCCACACTGGAAAGTAATTGGATTGGCCTTCAACTGTACACTTCTCCTCTTTGGATGTGTTATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAATGACTACTTGGACAAGAGAACTTGGACTTACATATTTGGAGCATGCTGTGCCACAACAGTGTTCATACCCTCATTACATAACTACAGGGTTTGGTCCTTCCTTGGCCTTGGCATGACCACATACACAGCTTGGTATTTGACCATTGCAGCCATTCTTCATGGCAAAGTTGAAAATGTGACACACACAGGCCCAAGCAAAATGGTATTGTATTTCACAGGCGCCACTAATATCCTCTACACTTTTGGTGGGCACGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAACCTCAGAAGTTCAAAAATATATATCTTTATGCGACACTATATGTATTCACCGTGACCATACCATCTGCTACTGCAGTGTATTGGGCCTTTGGTGATAAACTGTTAGACCATGCCAATGCCTTTGCCCTTCTTCCCCGCTCTGGCTGGCGTGATGCTGCTGTAATCTTAATGCTCCTTCACCAGTACTCCATTGCATTTTGTGTGGGAGAAAATGATAGGAGTGCATGGCACAAAGAACATATTATTGAGGGGAGGGGTATAGCCAGCTTCGCCGTCTATATCATCCCTGCTTGTGCTCATATGCTCACATATAAGTCTGCTTCTGCAAGAGAGAATGCCGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACCTTAATGTATGGGATCAATGCATTTGTGGTGGTGTGGATTCTAGTGGTAGGCTTTGGATTTGGATCTTGGGCTAGAATCACAAACATGATAAAGCAGGTTGGCACATTTGGACTATTTGCCAAGTGCTACCAATGCCCACCAAGAGGCATAGCTACCAACCACACACTTCATCACTGA 1365 0.4425 MTRDNLYWLSHDQVALFKTFRGTASRWKQTINHAVPRIKQPNSLATERKGEKEAGNTSAENIEGERKEQVAQVLLRLPCTFSQLGMVSGIILQVFYGILGCWTAYLISILYIEYRTRKERENVTFENHVIQWYEVLEGLLGPHWKVIGLAFNCTLLLFGCVIQLIACASNIYYINDYLDKRTWTYIFGACCATTVFIPSLHNYRVWSFLGLGMTTYTAWYLTIAAILHGKVENVTHTGPSKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKNIYLYATLYVFTVTIPSATAVYWAFGDKLLDHANAFALLPRSGWRDAAVILMLLHQYSIAFCVGENDRSAWHKEHIIEGRGIASFAVYIIPACAHMLTYKSASARENAAEKLPFFIPSWTLMYGINAFVVVWILVVGFGFGSWARITNMIKQVGTFGLFAKCYQCPPRGIATNHTLHH 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0231 454 MobiDBLite consensus disorder prediction 42 63 - -
Lal22g0231 454 PANTHER AUXIN INFLUX TRANSPORTER 61 337 - -
Lal22g0231 454 PANTHER AUXIN INFLUX TRANSPORTER 358 444 - -
Lal22g0231 454 MobiDBLite consensus disorder prediction 44 63 - -
Lal22g0231 454 Pfam Transmembrane amino acid transporter protein 67 332 IPR013057 -
Lal22g0231 454 PANTHER OS05G0424000 PROTEIN-RELATED 358 444 - -
Lal22g0231 454 PANTHER OS05G0424000 PROTEIN-RELATED 61 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0231 Lal-Chr22 1437099 1441736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0231 67 441 Organic Solute Cotransporters AT2G21050 66.505 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0231 K13946 - gmx:100817572 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0231 22 1437099 1441736 Lal22g0231 22 1437099 1441736 ECH
Lal18g1367 18 16028599 16033665 Lal22g0231 22 1437099 1441736 LSH
Lal22g0231 22 1437099 1441736 Lal6g0245 6 1591444 1595098 LSH
Lal18g1367 18 16028599 16033665 Lal22g0231 22 1437099 1441736 PCT
Lal22g0231 22 1437099 1441736 Lal18g1367 18 16028599 16033665 PCT