Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0057 ATGTCAAAATTTGAGGGTGTTGTTGTCTCCGATCAATGGCTCAATAGCCAGTTTATGCAGGTCGAACTTCGCACATTGAAATCCAAATTCGTCTCTTTAAAGGATCAGAATGGTAACGTTACATTGGGTGATTTGCCACATTTGATGGTCAAACTAAAGGAATTCAGAGACACATACAATGAAGATGAGATTAGAGGTATCTTGGGTGAGTCAGATGATAACGTGACCAATGATATTGATTTTGAAGCCTTCTTAAGGGCATATTTGAATTTGCAAAGCCAAGCTACAGAGAAACAAGATGGTAGAAGGCACTCTTCATCATTCCTCAAGGAGAGCGTGACAACCCTTCTTCACACAATCAGTGATTCAGAACAAGCTTGTTATGTTGCTCACATAAACAGCTACCTCGGTGATGATCCATTTCTGAAGCAATTTCTTCCTCTGGACCCGGCTACAAATGATCTTTTTGATCTTGTAAAGGATGGCGTTCTTCTTAAGCTTATCAATGTTGCTGTGCCTGGGACTATAGATGAACGAGCAATCAACACGACACGAAATCTCAGTCTTTGGCAGAGGAATGACAATCATACATTATGCCTCAATTCTGCCAAGGCTATTGGCTGCACAGTGGTTAACATTGGTGCGCAAGACTTGGTTGAAGGAAGACCTCATCTTGTTCTAGGGTTGATTTCGCAAATCATAAAGATCCAACTTTTGGCAGATCTCAACCTTAAGAAGACACCTCAGCTTGTGGAATTGGTTGATGACAGCCAGGATATAGAAGAGCTTCTTAGTTTGTCCCCTGAAAAGGTCCTACTAAAATGGATGAATTTTCATATCCAAAGAGGAGGTTACCAGAAAACTGTCAAAAACTTTTCTTCTGATGTTAAGGATGGAGAGGCTTATGCTTATCTGCTTAATGTCCTTGCTCCTGAGCATAGCAGTCCAGCAACCCTGGATACCAAGGACGCCTATGAAAGGGCAAATCTGGTTCTTGACCATGCAGAGAGAATGGGCTGCAAAAGATACTTGTCAGCAAGGGACATCAGAGAGGGTTCCTCAAATCTGAATCTTGCATTTGTGGCACAATTGTTTCATCATAGGAGTGGATTATCTACAGACACTAAAAAGATGTCCTTTGCTACGATGATGACGGATGATGCGCAAACATCTAGAGAAGAGAGATGCTTCCGGTTGTGGATCAATAGTCTTGGAATTTCTACATACGTATATAATGTATTTGAGGATGTCAGAAATGGATGGATACTTTTAGAAGTGCTAGACAAGATTTTTCCTGGATCAGTTAACTGGAATCATGCAACAAAACCTCCGATTAGGATGCCGTTCAGAAAAGTGGAGAACTGCAACCAGGTTGTAAAAATTGGTAAACAACTGAGATTTTCACTAGTCAATGTAGCTGGAAGTGACATTGTGCAAGGAAATAAGAAGCTCATTCTTGCTTTATTGTGGCAGTTGATGAGATTCACAATGCTTCAACTGTTGAAAAGATTGAGATCTCACTCCCAAGGAAGGGAGATAAGTGATGCTGATATCCTCAAATGGGCAAACAGAAAAGTGAATAGCACTGGCAGAACGTCTCACATAGAGAGTTTCAAGGATAAGAGCTTATCAAATGGACTCTTTTTTCTTGACCTTCTCAGTGCTGTGGAGCCTAGGGTTGTCAATTGGAACCTTGTCACCAAGGATGATGAAAAGAGGTTGAATGCTACCTACATAATCAGTGTTGCAAGAAAGCTTGGATGTTCCATCTTTTTGTTACCTGACGATATTATGGAGGTTAATCAGAAGATGATTCTGACTCTTACAGCAAGTATAATGTATTGGAGCCTTCAACAACAAAGTGAAGATACAGATCCATTTCCTTCACCTGCTGGTACAGCTACTACCACGACACCAGAAGCATCACCAGCACCATCAGTTTATGGTGAAGATGAAAGTAGTTTCTCCCTTGGAGGTGAATTCTCCAACATAAGTGTTGATGATGCCACCTCTGACATATCAGTGTCCTCTGAAGGTGTTCTAGTTGGAGATGAGCTATGA 2061 0.4115 MSKFEGVVVSDQWLNSQFMQVELRTLKSKFVSLKDQNGNVTLGDLPHLMVKLKEFRDTYNEDEIRGILGESDDNVTNDIDFEAFLRAYLNLQSQATEKQDGRRHSSSFLKESVTTLLHTISDSEQACYVAHINSYLGDDPFLKQFLPLDPATNDLFDLVKDGVLLKLINVAVPGTIDERAINTTRNLSLWQRNDNHTLCLNSAKAIGCTVVNIGAQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVDDSQDIEELLSLSPEKVLLKWMNFHIQRGGYQKTVKNFSSDVKDGEAYAYLLNVLAPEHSSPATLDTKDAYERANLVLDHAERMGCKRYLSARDIREGSSNLNLAFVAQLFHHRSGLSTDTKKMSFATMMTDDAQTSREERCFRLWINSLGISTYVYNVFEDVRNGWILLEVLDKIFPGSVNWNHATKPPIRMPFRKVENCNQVVKIGKQLRFSLVNVAGSDIVQGNKKLILALLWQLMRFTMLQLLKRLRSHSQGREISDADILKWANRKVNSTGRTSHIESFKDKSLSNGLFFLDLLSAVEPRVVNWNLVTKDDEKRLNATYIISVARKLGCSIFLLPDDIMEVNQKMILTLTASIMYWSLQQQSEDTDPFPSPAGTATTTTPEASPAPSVYGEDESSFSLGGEFSNISVDDATSDISVSSEGVLVGDEL 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0057 686 ProSiteProfiles Calponin homology (CH) domain profile. 512 617 IPR001715 GO:0005515
Lal6g0057 686 SUPERFAMILY EF-hand 14 98 IPR011992 -
Lal6g0057 686 CDD CH 392 494 IPR001715 GO:0005515
Lal6g0057 686 PANTHER FIMBRIN/PLASTIN 3 678 IPR039959 GO:0051015|GO:0051017
Lal6g0057 686 ProSiteProfiles Calponin homology (CH) domain profile. 122 238 IPR001715 GO:0005515
Lal6g0057 686 MobiDBLite consensus disorder prediction 621 643 - -
Lal6g0057 686 CDD CH 267 367 IPR001715 GO:0005515
Lal6g0057 686 Pfam Calponin homology (CH) domain 393 495 IPR001715 GO:0005515
Lal6g0057 686 Pfam Calponin homology (CH) domain 267 368 IPR001715 GO:0005515
Lal6g0057 686 Pfam Calponin homology (CH) domain 515 613 IPR001715 GO:0005515
Lal6g0057 686 Pfam Calponin homology (CH) domain 151 236 IPR001715 GO:0005515
Lal6g0057 686 SUPERFAMILY Calponin-homology domain, CH-domain 121 614 IPR036872 -
Lal6g0057 686 MobiDBLite consensus disorder prediction 621 655 - -
Lal6g0057 686 ProSitePatterns Actinin-type actin-binding domain signature 2. 210 234 IPR001589 -
Lal6g0057 686 SMART ch_5 514 615 IPR001715 GO:0005515
Lal6g0057 686 SMART ch_5 124 236 IPR001715 GO:0005515
Lal6g0057 686 SMART ch_5 268 367 IPR001715 GO:0005515
Lal6g0057 686 SMART ch_5 393 495 IPR001715 GO:0005515
Lal6g0057 686 CDD CH 513 617 IPR001715 GO:0005515
Lal6g0057 686 PANTHER FIMBRIN-1 3 678 - -
Lal6g0057 686 Gene3D - 118 243 IPR036872 -
Lal6g0057 686 Gene3D - 387 504 IPR036872 -
Lal6g0057 686 Gene3D - 505 614 IPR036872 -
Lal6g0057 686 ProSitePatterns Actinin-type actin-binding domain signature 2. 469 493 IPR001589 -
Lal6g0057 686 Gene3D - 244 372 IPR036872 -
Lal6g0057 686 ProSiteProfiles Calponin homology (CH) domain profile. 266 369 IPR001715 GO:0005515
Lal6g0057 686 CDD CH 149 236 IPR001715 GO:0005515
Lal6g0057 686 ProSiteProfiles Calponin homology (CH) domain profile. 391 497 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0057 Lal-Chr6 343174 349733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0057 1 668 EF-hand Containing Proteins AT5G55400 69.855 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0057 K17275 - gmx:100794850 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0057 6 343174 349733 Lal6g0057 6 343174 349733 ECH
Lal22g0061 22 372077 379010 Lal6g0057 6 343174 349733 LSH