Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0061 ATGTCAAAATTCGAGGGTGTTATTGTCTCGGATCAATGGCTTCATAGCCAGTTTACGCAGGTCGAACTTCGCAGCCTCAAATCCAAATTTGTCTCTTTAAAGAATCAGAATGGTAAAGTTACATACGGTGATTTGCCACCTTTGATGGTGAAACTAAAGGAATTCAGAGACACATACAATGAGGATGAGATTAGAGTTATCTTCGGTGAGTCAGATGCTAACGTGACCAATGATGTTGATTTTGAAGCCTTCTTAAGGGCATATTTGAATTTACAAAGCCAAGCTATAGTGAAACAAGGTGGTAGAAGACACTCTTCTTCATTCCTTAAGGATAGCGTAACTACCCTTCTTCACACAATCAGTGATTCAGAACAAGCTTGTTATGTTGCTCACATAAACAGCTACCTTGGTGACGATCCATTTCTAAATCAATTTCTTCCCCTGGACCCGTCTACAAATGATCTTTTTGATCTTGCAAAAGATGGCGTTCTTCTGTGTAAGCTTATCAATGTTGCTGTGCCTGGGACCATAGATGAACGGGCCATCAACGCCAAACAAAATCTCAGTCTTTGGCAGAAGAATGACAACCATAATTTATGCCTCAATTCTGCCAAGGCTATTGGCTGCACAGTGGTTAACATTGGCGCGCAAGACTTACTTGAAGGAAGACCTCATCTTGTTCTAGGGTTGATTTCCCAAATCATAAAGATCCAACTTTTGGCTGATCTCAACCTTAAGAAGACACCTCAGCTTGTGGAATTGGTTGATGACAGCCAGGAAATTGAAGAGCTTCTTAGTATGTCCCCAGAAAAGGTCCTACTGAAATGGATGAATTTTCATCTCCAGAGAGGAGGTTACCAGAAAACTGTCAAAAACTTTTCTTCTGATGTTAAGGATGGAGAGGCTTATGCCTATCTGCTTAATGTCCTTGCTCCTGAGCATAGCAGTCCGGCCACCTTGGATACTAAGGAACCCTATGAAAGGGCAAATCTTGTTCTCGACCATGCAGAGAGAATGGGCTGCAAAAGATACTTGTCAGCAAGGGACATCACAGAGGGTTCCTCAAATCTGAATCTTGCATTTGTCGCACAATTGTTTCATCACAGGAGTGGCTTATCTACAGACACTAAAAAGGTGTCCTTTGCTACGATGATGACGGATGATGTGCAAACATCTAGAGAAGAGAGATGCTTCCGGTTGTGGATCAATAGTCTTGGAATTTCTACTTACGTATACAATGTATTTGAGGATGTCAGAAATGGATGGATACTTTTAGAAGTGCTAGACAAGATTTTTCCGGGATCAGTTAACTGGAAACATGCAACAAAACCTCCGATTAGGATGCCATTCAGAAAAGTGGAGAACTGCAACCAGGTCGTAAAAGTTGGGAAACAACTGAGATTCTCACTAGTCAATGTAGCTGGCAATGATATTGTGCAAGGAAATAAGAAGCTCATTCTCGCTTTATTGTGGCAGTTGATGAGATTCACAATGCTTCAAATGTTGAAAAATTTGAGATTGCATTCACAAGGAAAGGAGATAAGTGATGCTGATATCCTCAAATGGGCAAACAGAAAAGTGAAAAGCACTGGCAGAACATCTCACATAGAGAGTTTCAAGGATAAGAGCTTGTCAAATGGGCTCTTTTTCCTTGAGCTTCTCAGTGCTGTGGAGCCTAGGGTTGTCAATTGGAACCTTGTCACCAAGGGTGAAAAAGATGATGAGAAGAGGTTGAATGCCACCTACATAATCAGTGTTGCTAGAAAGCTTGGATGTTCCATCTTTTTGTTACCTGATGATATTATGGAGGTTAATCAGAAGATGATTCTGACTCTTACAGCAAGTATAATGTATTGGAGCCTGCAACAACAAACTGAAGATACAGATTCATTTCCTTCACCTGGTGGTACTGCTACTACCACCACACCAGAAGCATCACCAGCACCATCAGTTTGTGGTGAAGATGAAAGTAGTTCCTCCATTGGTGGTGAATTCTCCAACATATGTGTTGATGATGCCACCTCTGACACAACAGTGTCCTCCTCTGAGGGTGTTCTTGTTGGAGATGAGCTATGA 2076 0.4157 MSKFEGVIVSDQWLHSQFTQVELRSLKSKFVSLKNQNGKVTYGDLPPLMVKLKEFRDTYNEDEIRVIFGESDANVTNDVDFEAFLRAYLNLQSQAIVKQGGRRHSSSFLKDSVTTLLHTISDSEQACYVAHINSYLGDDPFLNQFLPLDPSTNDLFDLAKDGVLLCKLINVAVPGTIDERAINAKQNLSLWQKNDNHNLCLNSAKAIGCTVVNIGAQDLLEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVDDSQEIEELLSMSPEKVLLKWMNFHLQRGGYQKTVKNFSSDVKDGEAYAYLLNVLAPEHSSPATLDTKEPYERANLVLDHAERMGCKRYLSARDITEGSSNLNLAFVAQLFHHRSGLSTDTKKVSFATMMTDDVQTSREERCFRLWINSLGISTYVYNVFEDVRNGWILLEVLDKIFPGSVNWKHATKPPIRMPFRKVENCNQVVKVGKQLRFSLVNVAGNDIVQGNKKLILALLWQLMRFTMLQMLKNLRLHSQGKEISDADILKWANRKVKSTGRTSHIESFKDKSLSNGLFFLELLSAVEPRVVNWNLVTKGEKDDEKRLNATYIISVARKLGCSIFLLPDDIMEVNQKMILTLTASIMYWSLQQQTEDTDSFPSPGGTATTTTPEASPAPSVCGEDESSSSIGGEFSNICVDDATSDTTVSSSEGVLVGDEL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0061 691 ProSiteProfiles Calponin homology (CH) domain profile. 267 370 IPR001715 GO:0005515
Lal22g0061 691 ProSitePatterns Actinin-type actin-binding domain signature 2. 470 494 IPR001589 -
Lal22g0061 691 Gene3D - 388 505 IPR036872 -
Lal22g0061 691 ProSiteProfiles Calponin homology (CH) domain profile. 392 498 IPR001715 GO:0005515
Lal22g0061 691 MobiDBLite consensus disorder prediction 627 665 - -
Lal22g0061 691 PANTHER FIMBRIN-1 3 683 - -
Lal22g0061 691 Gene3D - 506 618 IPR036872 -
Lal22g0061 691 ProSiteProfiles Calponin homology (CH) domain profile. 122 239 IPR001715 GO:0005515
Lal22g0061 691 CDD CH 149 237 IPR001715 GO:0005515
Lal22g0061 691 Gene3D - 245 373 IPR036872 -
Lal22g0061 691 CDD CH 514 621 IPR001715 GO:0005515
Lal22g0061 691 CDD CH 268 368 IPR001715 GO:0005515
Lal22g0061 691 PANTHER FIMBRIN/PLASTIN 3 683 IPR039959 GO:0051015|GO:0051017
Lal22g0061 691 Gene3D - 118 244 IPR036872 -
Lal22g0061 691 ProSitePatterns Actinin-type actin-binding domain signature 2. 211 235 IPR001589 -
Lal22g0061 691 SUPERFAMILY Calponin-homology domain, CH-domain 121 618 IPR036872 -
Lal22g0061 691 SMART ch_5 515 619 IPR001715 GO:0005515
Lal22g0061 691 SMART ch_5 124 237 IPR001715 GO:0005515
Lal22g0061 691 SMART ch_5 269 368 IPR001715 GO:0005515
Lal22g0061 691 SMART ch_5 394 496 IPR001715 GO:0005515
Lal22g0061 691 ProSiteProfiles Calponin homology (CH) domain profile. 513 621 IPR001715 GO:0005515
Lal22g0061 691 Pfam Calponin homology (CH) domain 268 369 IPR001715 GO:0005515
Lal22g0061 691 Pfam Calponin homology (CH) domain 516 617 IPR001715 GO:0005515
Lal22g0061 691 Pfam Calponin homology (CH) domain 150 237 IPR001715 GO:0005515
Lal22g0061 691 Pfam Calponin homology (CH) domain 394 496 IPR001715 GO:0005515
Lal22g0061 691 CDD CH 393 495 IPR001715 GO:0005515
Lal22g0061 691 SUPERFAMILY EF-hand 12 95 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0061 Lal-Chr22 372077 379010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0061 1 681 EF-hand Containing Proteins AT5G55400 69.353 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0061 - K17275 gmx:100810854 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0061 22 372077 379010 Lal22g0061 22 372077 379010 ECH
Lal22g0061 22 372077 379010 Lal6g0057 6 343174 349733 LSH