Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0054 ATGTGGAACTCACGCGCTCTTCATCTTCATCTTCTTCTTCACTCTTTCTTCCTTATAGCTTCCGTCTCAGCTCAGAGATCTAACACCAGCAGCGCTTGGAAAACACTCTCTGGAAGTCCACCATTGGTCATAGCACGTGGTGGTTTTTCGGGTCTATTTCCTGATTCGAGTGAGGATGCCTATGGTTTCGCAATCGTAACAAGTGTACCAGATGTCACTCTATGGTGTGATGTGCAGTTAACAAAAGATGGAGCTGGGATTTGCCTTCCAGATATCAACCTTGAAAATGCTACTGACATTTCAGTCATTTTCCAAAACAAAAGTACAAATTACCTAGTTAATGGTATACCTACCAGTGGCTATTTTTCTGTGGATTACACCCTCAAGGATCTATCCAGTGTTGCCTTGACTCAGGGAGTGCTTTCTCGAAGTGAATTGTTTGATGGCAGACTAAGTGCAATTCTCACTGTTGATGATTTAGTTAAAGCAGTAGCCCCACAAGGCTTGTGGTTGAACATTCAGCATAATGCATTCTACTCACAGCACAATTTGAGTATGAGAAATTTTGTACTTTCGGTTTCTAGAAGAGTCATTGTCAGTTATATCTCATCACCAGAAGTTGGTTTTCTGAGAAGTATAACAGCGCGCTTCAACCCAAAAACAACAAAGCTGGTCTTCAGGTTTCTGGGACAGGACGACAAAGAACCATCAACCAATCAGACTTATGGTTCACTCTTAAAAAATCTTACATTTATTAAGACTTTTGCTTCTGGAATTCTTGTTCCCAAGGGATACATATGGCCTGTAGATGCTAGCCTTTATCTACAACCACATACATCTTTGGTCTCAGATGCACATAAAGTGGGTCTGGAAGTATTTGCATCTGATTTTTTTAATGATGTTCCTTTCAGCTTTAATTACAGTTATGATCCTCTTGCCGAGTATCTCCAATTCATTGACAATGGTAATTTCTCTGTTGATGGTGTGCTATCCGACTTCCCCATAACTCCATCTGAAGCTGTTGATATTGAACTATCTTCGTATGATGCAGATTGCTTTGCTCACTTAGGGCCAAATGCCAAGAAAATAGACAACACTTTGATAATCTCAAAATATGGTGCAAGTGGAGATTTTCCCGCTTGTACCGACGTAGCATATAAACAGGCCATATCAGATGGTGCTGATGTTCTTGACTGTCCTGTTCAAGTTTCGAAGGATGGAATACCATTTTGCTCAAGCTCCATCGATCTTATAGAGAGTACATCAGTTGCTCAGTCAAGCTTCAGCACAGTTGCCGCAACCATCCCTGAAATCAAACCTACTGGCAGTGGCATATTTTCGTTCAGCTTGACGTGGGATAATATTAAATCCCTGACCCCATCAATATTGAACCCTTTTGCTACACAATACAAATTGTTCAGGAATCCAAAATATAAGAGTGTTGGATCACTTTTAACATTGTCTGAATTCTTATCATTGACAAAAAATCAGACTTCTCTATCTGGCATTGCTATTATTATTGAGAATGCAGCCTATCTTGCAGAGAAGCAAGGATTAGGTGTGACCGATTCAGTCATTGACGCTTTGAGCAAAGCCGGTTATGATAAACCAGGGGCCCAAAAAGTTTTTATTCAATCCACTAATAGCTCTGTTCTAAACAAGTTTAAGGAAAAAACCAATTATGAGCGTGTGTACAAGATTGACGAGACTGTTGGTGATGCTGCTACTAAAGCTGTTGATGATATAAAACGCTTTGCAAGTTCTGTGGTTATCAACAAGAACTCTGTATTTCCTCGTAACAAAGGCTTCATCATCCAATCTACAAATACCGTGTCAAAACTAAAATCTTCCAATCTCTCGGTTTTTGTTGAAACTTTCAGCAACGAGTATTTATCTCAGGCGTGGGATTTCTTCTCAGATGCAACCGTGGAGATAAACTCGTTTATCCAGGGATCAGATATTGATGGTATAATCACAGACTTTCCAAAAACTGCTAATAGATACAGAACAAACAAATGCTTAAAATTAGGTAATAAAACACCTCCTTACATGCAAGCTGTCCAACCAGGTGGTCTTTATGAACTCATCAGCAAAAATAACTTACCTCCAGCTATGGCTCCACTCCCACCTCTGTCTGATTCCGAGGTGGTAGAGGCACCTTTGCCTCCTGTTTCCAAGATAGCGCCGGCTTCTGGCCCTGATTCTGGAACCAAGCCAGGAACACAACCAAAGGGAAATACACAGCCCAAGGTTATTGCCTGCTTCTTCTTGTCCAGTCTTTCCCTGCTTGTAACTTCTCTTTTTCTACTTTGA 2313 0.4068 MWNSRALHLHLLLHSFFLIASVSAQRSNTSSAWKTLSGSPPLVIARGGFSGLFPDSSEDAYGFAIVTSVPDVTLWCDVQLTKDGAGICLPDINLENATDISVIFQNKSTNYLVNGIPTSGYFSVDYTLKDLSSVALTQGVLSRSELFDGRLSAILTVDDLVKAVAPQGLWLNIQHNAFYSQHNLSMRNFVLSVSRRVIVSYISSPEVGFLRSITARFNPKTTKLVFRFLGQDDKEPSTNQTYGSLLKNLTFIKTFASGILVPKGYIWPVDASLYLQPHTSLVSDAHKVGLEVFASDFFNDVPFSFNYSYDPLAEYLQFIDNGNFSVDGVLSDFPITPSEAVDIELSSYDADCFAHLGPNAKKIDNTLIISKYGASGDFPACTDVAYKQAISDGADVLDCPVQVSKDGIPFCSSSIDLIESTSVAQSSFSTVAATIPEIKPTGSGIFSFSLTWDNIKSLTPSILNPFATQYKLFRNPKYKSVGSLLTLSEFLSLTKNQTSLSGIAIIIENAAYLAEKQGLGVTDSVIDALSKAGYDKPGAQKVFIQSTNSSVLNKFKEKTNYERVYKIDETVGDAATKAVDDIKRFASSVVINKNSVFPRNKGFIIQSTNTVSKLKSSNLSVFVETFSNEYLSQAWDFFSDATVEINSFIQGSDIDGIITDFPKTANRYRTNKCLKLGNKTPPYMQAVQPGGLYELISKNNLPPAMAPLPPLSDSEVVEAPLPPVSKIAPASGPDSGTKPGTQPKGNTQPKVIACFFLSSLSLLVTSLFLL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0054 770 SUPERFAMILY PLC-like phosphodiesterases 365 669 IPR017946 GO:0006629|GO:0008081
Lal6g0054 770 MobiDBLite consensus disorder prediction 723 745 - -
Lal6g0054 770 CDD GDPD_SHV3_repeat_2 367 668 - -
Lal6g0054 770 Gene3D Phosphatidylinositol (PI) phosphodiesterase 365 668 IPR017946 GO:0006629|GO:0008081
Lal6g0054 770 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 340 IPR017946 GO:0006629|GO:0008081
Lal6g0054 770 ProSiteProfiles GP-PDE domain profile. 41 341 IPR030395 GO:0006629|GO:0008081
Lal6g0054 770 Pfam Glycerophosphoryl diester phosphodiesterase family 373 664 IPR030395 GO:0006629|GO:0008081
Lal6g0054 770 Pfam Glycerophosphoryl diester phosphodiesterase family 76 334 IPR030395 GO:0006629|GO:0008081
Lal6g0054 770 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 11 767 - -
Lal6g0054 770 ProSiteProfiles GP-PDE domain profile. 366 669 IPR030395 GO:0006629|GO:0008081
Lal6g0054 770 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 11 767 - -
Lal6g0054 770 CDD GDPD_SHV3_repeat_1 41 340 - -
Lal6g0054 770 SUPERFAMILY PLC-like phosphodiesterases 40 340 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0054 Lal-Chr6 327543 333650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0054 17 770 Receptor kinase-like Gene Family AT4G26690 55.364 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0054 - - gmx:100811399 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0054 6 327543 333650 Lal6g0054 6 327543 333650 ECH
Lal18g1597 18 17471029 17475496 Lal6g0054 6 327543 333650 LSH
Lal6g0054 6 327543 333650 Lal18g1597 18 17471029 17475496 PCT