Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1597 ATGATGAAAACTATGAGGGACTTCAGGGCTTTCTCTAATATACTAAATGTTCTACTTATTCTTCATTCATTGGTACCATTGATCTCTTCTTCTGGATGGAAAACATTGCAAGGATCTCCACCAGTGGTGATAGCACGTGGTGGGTTTTCAGGGATATTTCCAGATTCAAGCTTAGGTGCCTACAATTTGGCACTAGAAACAAGTGTTCCAAATGTGATCCTATGGTGTGATGTGCAGTTGACAAAGGATGAAGTTGGTATTTGTTTTCCACACTTGAAGCTGGACAATGCCACTGATATCTCCTTTCTTTACCCCGCAAGTGCCAAGAATTATTCACTTAATGGAATTCCAACTAAAGGATGGTTTTCCTTTGATTACAACTTGACTGAACTAGCAGATGTCTCGCTTCTTCAGGGAGTTTACTCTAGAACTAGTAGCTTTGATGGTAATCATTTTCGCATTCTCACCGTTGAAGATGTAGTTAAATTGGTAAAACCTCCCTCACCTGGCTTGTGGTTGAATGTTCAGAATGAAGCATTCATCCAGCAACAGAACTTGAGTACCAAACGATTTCTAAGTTCTCTTTCTACTCGAGGAGTATCAGTCAGTTATATCTCATCACCTGATGTGGGATTCTTAAGCAGCATGAAATCAGTCTTCAATCCTAGAACAACTGGATTGGTCTTCAGGTTTCTAAGGGAGAATGAGATTGAACCTACAACCAATCAGACTTATGGCTCACTCTTGAAAAATCTCGCGTATATCAGGACATTTGCTTCTGGAATTCTTGTTCCTAAGGGTTATATATGGCCTGTAAACTCATACCTTTACCTACAACCATATACCTCTATTGTCTCTGATGCTCATAAAGAAGGGCTACAAGTATTTGTATCAGACCTTGTTAATGATGTTCCATTTAGTTACAATTTTAGTTATGATCCTCTTGCTGAGTGTCTAGCTTTTATTGACAATGGTAAATTCTCTGTTGACGGTGTGCTGTCCGACTTTCCAATAACTCCATCCGCAGCCATAAATTGCTTTTCTGGTCTGGAGAGAAATGCCAGAAAACAAGTGGACACTTTGATTATCTCAAAATATGGAGCAAGTGGAGATTATCCTGCTTGTACTGACTTGTCTTACAAGAAAGCTATATTAGATGGAGCAGATGTAGTTGACTGTCCTATTCAGATGTCCAAGGATGGAATACCATTTTGCTTAAGCTCTATAGATCTTGTAGAAAGCACAACAGTGGCTGAATCAAATTTCTCAAACCTTAGAACAACTATTCCGGAGATTAAATCTGGCAGTGGCATATATGCCTTCAGCTTGAAATGGAATGATATAAAAACCTTGACTCCCTCAATATTGAGCCCCTACTCAAGATACGGATTGAACCGGAATCCAAAATTCAGAAACCAAGGGAAACTTTTAACCTTGTCTGATTTCTTGTCCTTGACAAAAGGTCAGACATCTGGGGTTTTGATCAGCATAGAGAATGCAGCCTACCTTGAAGAGAAGCAAGGACTAAGCGTGACCAACGCAGTCCTTAATGCTTTGCAGAAAGTAGGTTGTGATAAGCCAGGGTCCCAAAAAGTTATGATTCAATCCAGTCATAGCTCTGTCCTGAAGATATTCAAGGAGAAATCCAAATATGAAAGGTTATACAAAGTTGATAAGAGTATTGGTGATGCTCTTGATTCAGCTGTTGAGGATATAAAGTCATTTTCTGATTCTGTGGTTATTGGAAAGGCATCGGTTATTCCTCAAAGTGAAGGCTTTCTAGTTAACTACACAAACACTGTGACAAAGCTACAATCATTTAACCTCTCAGTTTATGTAGAAACTTTCAGCAATGAGTTTGTATCTCAGGCATGGGACTACTACTCAGATGCATTTGTTGAGATAAATTCATTTGTTGTTGGAGCCAAAGTTAACGGAATTATCACCGACTTCCCCAAGACCGCAGATAGATACAGAAAAAACTTGTGTTTAAAGGAGGGAAAGAAACCAGCTTATATGAGCCCTGTTGAACCAGGAAAACTATTACAACAAATTTCAAAGGCATACTTTCCACCACCTTCTCCACCACTTCCAGTATTGACTGATACTAATGTCACAGAGCCACCTTTGCCTTCCGTTCCTGCTCCTACCACTGCTCCAGCCCCCACCACACCATAA 2178 0.3981 MMKTMRDFRAFSNILNVLLILHSLVPLISSSGWKTLQGSPPVVIARGGFSGIFPDSSLGAYNLALETSVPNVILWCDVQLTKDEVGICFPHLKLDNATDISFLYPASAKNYSLNGIPTKGWFSFDYNLTELADVSLLQGVYSRTSSFDGNHFRILTVEDVVKLVKPPSPGLWLNVQNEAFIQQQNLSTKRFLSSLSTRGVSVSYISSPDVGFLSSMKSVFNPRTTGLVFRFLRENEIEPTTNQTYGSLLKNLAYIRTFASGILVPKGYIWPVNSYLYLQPYTSIVSDAHKEGLQVFVSDLVNDVPFSYNFSYDPLAECLAFIDNGKFSVDGVLSDFPITPSAAINCFSGLERNARKQVDTLIISKYGASGDYPACTDLSYKKAILDGADVVDCPIQMSKDGIPFCLSSIDLVESTTVAESNFSNLRTTIPEIKSGSGIYAFSLKWNDIKTLTPSILSPYSRYGLNRNPKFRNQGKLLTLSDFLSLTKGQTSGVLISIENAAYLEEKQGLSVTNAVLNALQKVGCDKPGSQKVMIQSSHSSVLKIFKEKSKYERLYKVDKSIGDALDSAVEDIKSFSDSVVIGKASVIPQSEGFLVNYTNTVTKLQSFNLSVYVETFSNEFVSQAWDYYSDAFVEINSFVVGAKVNGIITDFPKTADRYRKNLCLKEGKKPAYMSPVEPGKLLQQISKAYFPPPSPPLPVLTDTNVTEPPLPSVPAPTTAPAPTTP 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1597 725 SUPERFAMILY PLC-like phosphodiesterases 360 659 IPR017946 GO:0006629|GO:0008081
Lal18g1597 725 SUPERFAMILY PLC-like phosphodiesterases 40 343 IPR017946 GO:0006629|GO:0008081
Lal18g1597 725 Pfam Glycerophosphoryl diester phosphodiesterase family 367 654 IPR030395 GO:0006629|GO:0008081
Lal18g1597 725 ProSiteProfiles GP-PDE domain profile. 41 344 IPR030395 GO:0006629|GO:0008081
Lal18g1597 725 ProSiteProfiles GP-PDE domain profile. 360 659 IPR030395 GO:0006629|GO:0008081
Lal18g1597 725 MobiDBLite consensus disorder prediction 709 725 - -
Lal18g1597 725 MobiDBLite consensus disorder prediction 693 725 - -
Lal18g1597 725 CDD GDPD_SHV3_repeat_1 41 343 - -
Lal18g1597 725 CDD GDPD_SHV3_repeat_2 361 658 - -
Lal18g1597 725 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 343 IPR017946 GO:0006629|GO:0008081
Lal18g1597 725 Gene3D Phosphatidylinositol (PI) phosphodiesterase 359 658 IPR017946 GO:0006629|GO:0008081
Lal18g1597 725 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 10 716 - -
Lal18g1597 725 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FAMILY PROTEIN 10 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1597 Lal-Chr18 17471029 17475496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1597 8 725 Receptor kinase-like Gene Family AT4G26690 55.096 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1597 - - gmx:100799882 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1597 18 17471029 17475496 Lal6g0054 6 327543 333650 LSH
Lal18g1597 18 17471029 17475496 Lal18g1597 18 17471029 17475496 PCT
Lal6g0054 6 327543 333650 Lal18g1597 18 17471029 17475496 PCT