Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1796 ATGGTGAATGAGGGAGTTGAGGAGATGGAGAGTGAAACTTCTATGGAGGAGGAGCCTATTAGGGAACACCGTATATACCCTCCCCTTTGTATTGGATTGGTGAAGAAGAGAGCTTGTGTATTTGATGGAATGGGTAATTTTTATCATAAGGATTGGGACCTAGCAGACCTTTATCAAAAAGAGCAACAAGATTTGGATGCAACAGAAAGTCGAGGGTCGAATAAGTTTTCTTGGTACCATGTCGAACTCCCAAAAGGAAATAAAAAATTGTCGCAATCTGCACAGGATTTGATTGGTGTTCTTTGCCCGCCTTTGAAACTCCAAGACATTCTATCAATTGTCAGCAATGGACCCTTCTGTGCACATGTTGACGGGGCACTTGTTTTCCGGGTTAATTCACCTGGACCTTCCTCAAGTGACTTCACATTTAGAATTGCAGCTAGAGTTACAGAAACTTCAGTGATCACCGTGTCTTTGGGGCGTGTTCCCCGGCTAGGTTTCTCACGCATGGGCGAATCTCTACTTTCTGAGATTCCTAGTATTGAAAGATCCCCTCAGTCTAGAGGTCAGCAGCAGGAAGGAAGGGGTGTTGTGATTAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCACTCTGAGGAAGCTGACAACCGTGTTCCTAGGTCTGTCTCAAATCTCGTAGTTCACATAATTGACACACATGTAGATCAGCTTCAAGATATTGTGACAAAGCTTGAGATGGAGTTGGACTTCGCGGAGCTTGACTTGGATAAAGGATATATTGATTCTGACATTATAGCACTCTTCATGGCATACAAATCCATAATGTTCTTAATTGCTGCAAGTGGTCATGATCTGAAGAAAGAAATGCTAGATGACAGGAGATTCCCCAAACTGCATATTAATTTACAGCGTCTACTGCAGGTGATTACCTATGGAGAGCAAACATATCTCCGAGTCAAAGAAAAATGCTCTTCAAAAAGATGGTTTGCCAATGAAGACATTAACTCCCTTGAAGAACTAATTGGAAGGTTAAGGAGGTTGAAGGAGAACGTAGGGTTTATCATAAATCGTGTAACAGCAATTCAGGCAGGCCTCGATAGCTGGCAATCAGAGCAAATAAACAGGAAACTCTACTATCTTTCATTTCTTTCCATAGTATTCCTACCTCTATCCGTCATAACAGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGGCAAAATGTGCCAGAGCTAAACGATGGTTTTCGTAATGTGATGTTACTTTGTGTTGTTATGATACTTTTTATACTACTCTGCTTCATTTTCCCAGCTCTTTATAGACATATTGCTGCTGCCTGGCAAAACAAGAGAACTCTGGGAAGAAGCTGCCCACTTAGCAAGAAATCTTTGCTCAAGAGAACTTCAAGAATAGTAAATCAGGACAGAGGGAGTTACCTTCAAATTTAA 1461 0.4148 MVNEGVEEMESETSMEEEPIREHRIYPPLCIGLVKKRACVFDGMGNFYHKDWDLADLYQKEQQDLDATESRGSNKFSWYHVELPKGNKKLSQSAQDLIGVLCPPLKLQDILSIVSNGPFCAHVDGALVFRVNSPGPSSSDFTFRIAARVTETSVITVSLGRVPRLGFSRMGESLLSEIPSIERSPQSRGQQQEGRGVVIKEHVLEFLLTMNHSEEADNRVPRSVSNLVVHIIDTHVDQLQDIVTKLEMELDFAELDLDKGYIDSDIIALFMAYKSIMFLIAASGHDLKKEMLDDRRFPKLHINLQRLLQVITYGEQTYLRVKEKCSSKRWFANEDINSLEELIGRLRRLKENVGFIINRVTAIQAGLDSWQSEQINRKLYYLSFLSIVFLPLSVITGVFGMNVGGVPWTGQNVPELNDGFRNVMLLCVVMILFILLCFIFPALYRHIAAAWQNKRTLGRSCPLSKKSLLKRTSRIVNQDRGSYLQI 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1796 486 Coils Coil 236 256 - -
Lal5g1796 486 Gene3D Magnesium transport protein CorA, transmembrane region 371 443 - -
Lal5g1796 486 SUPERFAMILY CorA soluble domain-like 56 364 IPR045861 -
Lal5g1796 486 Gene3D Magnesium transport protein CorA, transmembrane region 221 370 - -
Lal5g1796 486 Pfam CorA-like Mg2+ transporter protein 216 440 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal5g1796 486 Coils Coil 332 352 - -
Lal5g1796 486 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 374 438 IPR045863 -
Lal5g1796 486 PANTHER OS08G0130000 PROTEIN 5 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1796 Lal-Chr5 19873801 19878643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1796 - - lang:109329181 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1796 5 19873801 19878643 Lal3g0045 3 278284 282092 LSH