Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0045 ATGAGTGGACATACTAGCCAATATATGGGTAAGAGTAAATTCATTAAGGAGAAAATTGAGGTAGCTCCTATTGTAGAAAAGTTGTATGTGTGGAGGAGACTGCTTGAAGTCCCAGTAAGGAGAGTATATCACATGGAGGTTAGTGCTATTTCTAGAGGCAAAAGGAGACCAATAAAATCCATAGTTGGAAGCATAATTTGGGGCTACTTGGCAAAAATTATGGAACTGGCTAAGCATAGAGTAATGGTGAATGGGGGAGCTGAGGAGATGGAAACTGAAACTTCTGTAGAGGAGCCTCTCAGGGTCATGGAACACCGAATCTACCATTCCCATCCTGCCGAATTGGTGAAGAAGAGAGTCTATGTATTTGATGGCATGGGGAACTTTTATCATAAGGATTGGGATCTAGCAGACCTTTATCGAAAAGAAAATCAGGATCGGGATGCAGCAGAAGGTCGGGGAGTGAATGAGTTTTCTTGGTACCATGTGGAACTCCCAAAAGGAAATCAGAACTTGTCACAATCTGCACAGAATTTGATTGGTATTCTTTGCCCTCCTTTGAAACTCCAAGACATTCTATCACTTGTTAGCAATGGACCCTTTTGTGCACATGTTGACGGGGCGCTTGTTTTCCGGGTTAATTCTCCTGGACCTCCCTCCAGTGACTTCACGTTTAGAATTGCTGCTAGAGTTACAGAGAATTCAGTTATCACTGTGTCTTTGGGGCGTGTTCCTCGGTTAGGTTTCTCACGCGTGGGTGAATCTCTACTTTTTGAGATTCCTAGTGTTGAAAGATCTCCTCAGTCTAGAGGTCAGCAGCAGGAGGGAAGTGGGATTGTGATTAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCACTCTGAGGAAGCTGATAATCCTGTTCCCATGTCTGTCTCAAATCTCGTAGTTCACATAATTGACACACATGTAGATCAGCTTCAAGATATTGTGACAAAGCTTGAGATGGAGTTGGACTCTGCGGAGCTTGACTTAGATAAAGGCGGTTATGCTCTAAAGAAAGAAATGCTAGATGACAGAAGATTCGCCAAACTGCATATTAATTTGCAGCGTCTACTGCAGGTGATTGCCCATGGAGAGCAAGTATATCTCCGAGTCAAAGAAAAATGTTCCTCAAAAAGATGGTTTGCCAATGAAGACATTAACTCCCTTGAAGAACTAATCGGAAGGTTAAGGAGGTTGAAGGAGAACGTAGGGTTTATCGTAAATCGAGTCACAGCAATTCAGGCAGGTCTTGATAGCTGGCAGTCAGAGCAAATAAACAGGAAACTCTACTATCTATCATTCCTTTCCATAATATTCCTCCCTTTATCCATCATAACAGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACTGGGCAGAATGTCCCTGAGTTGAAGGAGGGTTTCCGTAATGTCATGTTACTCTGTGTTGCAATGCTACTTCTCATACTACTCTGCTTCATTTTTCCTGTTCTTTATACACGTATAACTGCTGCTTGGCAAAACAAGAGAGCTCTGAGAAGAAGCTGGTCATTGAACAGAAAATCTTTGCTGAGGAGAACTTCAAGAATAGTAGATCAGGAGAGAGGGGTCTACCGTCACATATAA 1638 0.4243 MSGHTSQYMGKSKFIKEKIEVAPIVEKLYVWRRLLEVPVRRVYHMEVSAISRGKRRPIKSIVGSIIWGYLAKIMELAKHRVMVNGGAEEMETETSVEEPLRVMEHRIYHSHPAELVKKRVYVFDGMGNFYHKDWDLADLYRKENQDRDAAEGRGVNEFSWYHVELPKGNQNLSQSAQNLIGILCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPSSDFTFRIAARVTENSVITVSLGRVPRLGFSRVGESLLFEIPSVERSPQSRGQQQEGSGIVIKEHVLEFLLTMNHSEEADNPVPMSVSNLVVHIIDTHVDQLQDIVTKLEMELDSAELDLDKGGYALKKEMLDDRRFAKLHINLQRLLQVIAHGEQVYLRVKEKCSSKRWFANEDINSLEELIGRLRRLKENVGFIVNRVTAIQAGLDSWQSEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNVPELKEGFRNVMLLCVAMLLLILLCFIFPVLYTRITAAWQNKRALRRSWSLNRKSLLRRTSRIVDQERGVYRHI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0045 545 PANTHER OS08G0130000 PROTEIN 74 542 - -
Lal3g0045 545 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 433 497 IPR045863 -
Lal3g0045 545 Coils Coil 391 411 - -
Lal3g0045 545 Pfam CorA-like Mg2+ transporter protein 298 498 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal3g0045 545 SUPERFAMILY CorA soluble domain-like 121 424 IPR045861 -
Lal3g0045 545 Gene3D Magnesium transport protein CorA, transmembrane region 303 429 - -
Lal3g0045 545 Gene3D Magnesium transport protein CorA, transmembrane region 430 503 - -
Lal3g0045 545 Coils Coil 318 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0045 Lal-Chr3 278284 282092 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0045 - - lang:109329181 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0045 3 278284 282092 Lal3g0045 3 278284 282092 ECH
Lal5g1796 5 19873801 19878643 Lal3g0045 3 278284 282092 LSH