Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1783 ATGGGGTTATCCAATTATCTTTCATTCTCTCTATTCTTCTATGTCTTGGTCTTAGTCAACATTGTGGGTCATGTTGTCTATGCTCAAGACTCACAAGCAGACTACCTCAATGCTCATAACGCTGCAAGATCAGAAGTTAATGTTGCAAACTTGGTTTGGGATGATACTGTTGCTGCTTTTGCTCAAAGCTATGCTGATCAACGCAAAGGTGACTGCAACCTTGTTCACTCAGGTGGTGGTGGAATTTATGGTGAGAATATTGCAATGAGCACCGGTGACCTAACTGGCAATGATGCAGTGAAATTATGGGTGGATGAGAAACCCAATTATGATTACAATTCTAACTCTTGTGTTGGTGGAGAGTGCCTTCATTATACTCAAGTGGTTTGGAGAAACACACAAAGTATTGGTTGTGCCAAAGTAAGATGTGATAATGGAGGCACATTCATCACTTGCAACTATAACCCCCCTGGCAATTATGTTGGGGAAAGACCTTACTAA 501 0.4132 MGLSNYLSFSLFFYVLVLVNIVGHVVYAQDSQADYLNAHNAARSEVNVANLVWDDTVAAFAQSYADQRKGDCNLVHSGGGGIYGENIAMSTGDLTGNDAVKLWVDEKPNYDYNSNSCVGGECLHYTQVVWRNTQSIGCAKVRCDNGGTFITCNYNPPGNYVGERPY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1783 166 Pfam Cysteine-rich secretory protein family 36 154 IPR014044 -
Lal5g1783 166 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 15 166 - -
Lal5g1783 166 SMART SCP_3 30 162 IPR014044 -
Lal5g1783 166 Gene3D CAP 29 166 IPR035940 -
Lal5g1783 166 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 15 166 IPR001283 -
Lal5g1783 166 CDD CAP_PR-1 32 166 - -
Lal5g1783 166 SUPERFAMILY PR-1-like 26 166 IPR035940 -
Lal5g1783 166 ProSitePatterns CRISP family signature 2. 149 160 IPR018244 GO:0005576
Lal5g1783 166 PRINTS Allergen V5/Tpx-1 family signature 51 69 IPR001283 -
Lal5g1783 166 PRINTS Allergen V5/Tpx-1 family signature 99 112 IPR001283 -
Lal5g1783 166 PRINTS Allergen V5/Tpx-1 family signature 122 138 IPR001283 -
Lal5g1783 166 PRINTS Allergen V5/Tpx-1 family signature 149 162 IPR001283 -
Lal5g1783 166 PRINTS Venom allergen 5 signature 51 69 IPR002413 -
Lal5g1783 166 PRINTS Venom allergen 5 signature 97 112 IPR002413 -
Lal5g1783 166 PRINTS Venom allergen 5 signature 121 140 IPR002413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1783 Lal-Chr5 19774796 19775296 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1783 K13449 - gmx:100805116 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1783 5 19774796 19775296 Lal5g1783 5 19774796 19775296 ECH
Lal5g1783 5 19774796 19775296 Lal11g0112 11 755369 757414 LSH