Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0112 ATGAGGTCCCCATACCTTGTGATTACAACCATTTTGTTCATCATGATCTCAATTTGCTTAGCCCAAAACACCCCTAAAGATTTCCTTAAGGTACACAATCAAGCCAGGAAAGAGGTTGGTGTTGGTCCACTCTCATGGAACAAAACCCTTGAAGCCTATGCTCAGAACTATGCAAATGGGAAGATTAAAGACTGCAAAATGGAGCACTCTAATGGGCCATATGGTGAGAATCTGGCTGAGGGTTATGGTGAGATGAAGGGTTCAGATGCTGTAAAGTTCTGGCTCACTGAGAAGCCTAACTATGATTATAAGTCTAATTCATGTGTAAATGATGAGTGTGACCATTATACTCAGATTGTGTGGCGTAAGTCTGTTCATCTTGGATGTGCTAGAGTTAAGTGTAACAACAATTGGGTCTTTGTTATTTGTAACTATTCTCCACCAGGAAATTATATAGACTATGCTCATAACTATGCAAATTGGAAGATTAAAGACTGCCAAATGGAACACTCTAATGGGCCATATGGTGAGAACCTGGTTGAGGGTTATGGTGAGATGAAGGCTTCAGATGTTGTGAAGTTCTGGCTGACCGAGAAGCCTAACTATGATTATAATTCTAAATCATGTGTAAAAGATGAGTGTGACCATTATACTCAGATTGTGTGGCGTGATTCTGTTCATCTTGGGTGTGCTAGAGTTAAGTGTCACAATAACTGGGTCTTTATTATTTGTAGCTATTCTCCACCAGACAATGTTATTAGTGAACGACCTTATATAATGTGA 783 0.3959 MRSPYLVITTILFIMISICLAQNTPKDFLKVHNQARKEVGVGPLSWNKTLEAYAQNYANGKIKDCKMEHSNGPYGENLAEGYGEMKGSDAVKFWLTEKPNYDYKSNSCVNDECDHYTQIVWRKSVHLGCARVKCNNNWVFVICNYSPPGNYIDYAHNYANWKIKDCQMEHSNGPYGENLVEGYGEMKASDVVKFWLTEKPNYDYNSKSCVKDECDHYTQIVWRDSVHLGCARVKCHNNWVFIICSYSPPDNVISERPYIM 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0112 260 SUPERFAMILY PR-1-like 22 154 IPR035940 -
Lal11g0112 260 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 17 150 IPR001283 -
Lal11g0112 260 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 154 258 IPR001283 -
Lal11g0112 260 Gene3D CAP 154 258 IPR035940 -
Lal11g0112 260 Gene3D CAP 23 153 IPR035940 -
Lal11g0112 260 Pfam Cysteine-rich secretory protein family 170 246 IPR014044 -
Lal11g0112 260 Pfam Cysteine-rich secretory protein family 29 145 IPR014044 -
Lal11g0112 260 SMART SCP_3 23 153 IPR014044 -
Lal11g0112 260 SMART SCP_3 154 254 IPR014044 -
Lal11g0112 260 CDD CAP_PR-1 25 152 - -
Lal11g0112 260 SUPERFAMILY PR-1-like 154 258 IPR035940 -
Lal11g0112 260 ProSitePatterns CRISP family signature 1. 114 124 IPR018244 GO:0005576
Lal11g0112 260 ProSitePatterns CRISP family signature 2. 140 151 IPR018244 GO:0005576
Lal11g0112 260 PANTHER - 17 150 - -
Lal11g0112 260 PANTHER - 154 258 - -
Lal11g0112 260 ProSitePatterns CRISP family signature 1. 215 225 IPR018244 GO:0005576
Lal11g0112 260 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Lal11g0112 260 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Lal11g0112 260 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
Lal11g0112 260 PRINTS Allergen V5/Tpx-1 family signature 140 153 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0112 Lal-Chr11 755369 757414 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0112 K13449 - gmx:100527778 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0112 11 755369 757414 Lal11g0112 11 755369 757414 ECH
Lal5g1783 5 19774796 19775296 Lal11g0112 11 755369 757414 LSH