Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1782 ATGGGGCTATCCAATTATCTTTCATTCTCTCTATTCTTCTATGTCTTGGTCTTAGTCAACATTGTAGGTCTTGTTGCCTATGCTCAAGACTCACAAGAAGACTACCTCAATGGTCAGAACGCTGTAAGATCAGAAGTTAATGTTCCAAACTTGGTTTGGAATGATACTGTTGCGGCTTTCGCACAAAACTATGCTAATGAACGCAAAGATTGCCAACTTGAGCACTCAGATGGTGGTGGAAACTATGGTGAGAATATTGCAATGAGCACAGGTGAGATGTTTGGCACTGATGCAGTAAGCATGTGGGTGGGTGAGAAACCAAACTATGATGTCAATTCTAACTCTTGTGTTGGTGGAGAATGCCTTCATTATACTCAAGTGGTTTGGAGAACCACAACAAGCATTGGATGTGCCAAAGTAAGATGTGATAATGGAGGCACATTCATCACTTGCAACTATTATCCCCCTGGTAACTATATGGGGGATAGACCTTACTAA 498 0.4157 MGLSNYLSFSLFFYVLVLVNIVGLVAYAQDSQEDYLNGQNAVRSEVNVPNLVWNDTVAAFAQNYANERKDCQLEHSDGGGNYGENIAMSTGEMFGTDAVSMWVGEKPNYDVNSNSCVGGECLHYTQVVWRTTTSIGCAKVRCDNGGTFITCNYYPPGNYMGDRPY 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1782 165 Gene3D CAP 25 165 IPR035940 -
Lal5g1782 165 ProSitePatterns CRISP family signature 2. 148 159 IPR018244 GO:0005576
Lal5g1782 165 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 15 165 - -
Lal5g1782 165 SMART SCP_3 30 161 IPR014044 -
Lal5g1782 165 SUPERFAMILY PR-1-like 23 165 IPR035940 -
Lal5g1782 165 CDD CAP_PR-1 32 165 - -
Lal5g1782 165 Pfam Cysteine-rich secretory protein family 37 153 IPR014044 -
Lal5g1782 165 PRINTS Venom allergen 5 signature 51 69 IPR002413 -
Lal5g1782 165 PRINTS Venom allergen 5 signature 96 111 IPR002413 -
Lal5g1782 165 PRINTS Venom allergen 5 signature 120 139 IPR002413 -
Lal5g1782 165 PRINTS Allergen V5/Tpx-1 family signature 51 69 IPR001283 -
Lal5g1782 165 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Lal5g1782 165 PRINTS Allergen V5/Tpx-1 family signature 121 137 IPR001283 -
Lal5g1782 165 PRINTS Allergen V5/Tpx-1 family signature 148 161 IPR001283 -
Lal5g1782 165 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 15 165 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1782 Lal-Chr5 19767643 19768140 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1782 K13449 - gmx:100805116 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1782 5 19767643 19768140 Lal5g1782 5 19767643 19768140 ECH
Lal5g1782 5 19767643 19768140 Lal11g0113 11 768589 769059 LSH