Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0113 ATGAGGTCCCCATACCTTGTGATCACAACCATTTTATTCATCATGATCTCAACTTGCTTAGCCAACACCCGTAGAGATTTCCTTAAGGTACACAACCAAGCCAGGAAAGAGGTTGGTGTTGGTCCACTCACATGGAACAAAACCCTTGAAGCCTATGCTCAGAACTATGCAAATGGGAAGATTAAAGACTGCCAAATGGAACACTCTAATGGACCATATGGTGAGAATCTGGCCGAGGGTTATGAAGAGATGAAGGCTTCAGATGCTGTGAAGTTCTGGCTCACTGAGAAGCCTAACTATGATTATAATTCTAATTCATGTGTAAATGATGAGTGTGGTCATTATACTCAGATTGTGTGGCGTAATTCTGTTTCTCTTGGGTGTGCTAAAGTTAAGTGTGAGAATAACTGGGTCTTTGTTATTTGTAACTATTATCCACCGGGCAATTATATAGGTGAACGACCCTATTGA 471 0.4119 MRSPYLVITTILFIMISTCLANTRRDFLKVHNQARKEVGVGPLTWNKTLEAYAQNYANGKIKDCQMEHSNGPYGENLAEGYEEMKASDAVKFWLTEKPNYDYNSNSCVNDECGHYTQIVWRNSVSLGCAKVKCENNWVFVICNYYPPGNYIGERPY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0113 156 SUPERFAMILY PR-1-like 21 156 IPR035940 -
Lal11g0113 156 PANTHER - 17 156 - -
Lal11g0113 156 Pfam Cysteine-rich secretory protein family 28 144 IPR014044 -
Lal11g0113 156 CDD CAP_PR-1 25 156 - -
Lal11g0113 156 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 17 156 IPR001283 -
Lal11g0113 156 ProSitePatterns CRISP family signature 1. 113 123 IPR018244 GO:0005576
Lal11g0113 156 Gene3D CAP 22 156 IPR035940 -
Lal11g0113 156 PRINTS Allergen V5/Tpx-1 family signature 43 61 IPR001283 -
Lal11g0113 156 PRINTS Allergen V5/Tpx-1 family signature 89 102 IPR001283 -
Lal11g0113 156 PRINTS Allergen V5/Tpx-1 family signature 112 128 IPR001283 -
Lal11g0113 156 PRINTS Allergen V5/Tpx-1 family signature 139 152 IPR001283 -
Lal11g0113 156 SMART SCP_3 22 152 IPR014044 -
Lal11g0113 156 ProSitePatterns CRISP family signature 2. 139 150 IPR018244 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0113 Lal-Chr11 768589 769059 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0113 K13449 - gmx:100527778 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0113 11 768589 769059 Lal11g0113 11 768589 769059 ECH
Lal5g1782 5 19767643 19768140 Lal11g0113 11 768589 769059 LSH