Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1183 ATGAAGTCTTCTCGGGTGGAAGATTTTGCGAAAAGGGGTGCATTCCCTTTGTGTCCTACCCAAAATGGGTTGATGTTTGTGCCTCTCACGTCGAAGCTGTCTTTTTCATCTCAACTAAAGGATATTGACATAGTTCTCCATAAAGCCACTGATGAAATATTATCTATTGAAGAGAACAGACTTACTTTTACACACAACATGCAAGAACTACAAAGATATTTGGAACATCACAAGGATTTCTGTGTGGTTGACCCTCTGAGTAACATTTATCGTTTATTGGATCGAGTAGAAATTCAAAAGGTGCTACTTGGCTTGGAAGAACTAAACACTGAAGGCAGCTATTTGATCAGAGGGGCTAATTTTTTTGAAATAAAACCCAAAGTTGCATGTGGCATGAGTGATGCACACGCGATGGCAATTGTTTTCAGAGTCAATGATTTTAAGAATTTAAATGTTCCTCTTCCTGCTGTTATTCAGGAATATGTGGATCATTTATCCACTCTGTACGAATTTTATGTCTTGGGTGAGAAAGTTTTCTATGCTGTCAAGAAATCGATACCGAATGCTGATATTTTGATGAGATCATATAATGGTGATGACCTCAAACCTCTATTGTTTGATAGCCTAAAATCTCTACCCACTGCTGACAGCATTCAGGATTCTGGAGCCAATAACAGTAATATGTCAAGTAATGAGTCTATTGACCTCAAGCTCGTTCAGACGCCGCACATTGGCTTAGGAAAATGCTTCATCTTAGCATCTTTGGAAGGGACTCATGACCATGGTGGTCTAAATGAGCATCTGTTTCAACTTCGCAACTTGCCGATTCTTTTTACATAA 840 0.3893 MKSSRVEDFAKRGAFPLCPTQNGLMFVPLTSKLSFSSQLKDIDIVLHKATDEILSIEENRLTFTHNMQELQRYLEHHKDFCVVDPLSNIYRLLDRVEIQKVLLGLEELNTEGSYLIRGANFFEIKPKVACGMSDAHAMAIVFRVNDFKNLNVPLPAVIQEYVDHLSTLYEFYVLGEKVFYAVKKSIPNADILMRSYNGDDLKPLLFDSLKSLPTADSIQDSGANNSNMSSNESIDLKLVQTPHIGLGKCFILASLEGTHDHGGLNEHLFQLRNLPILFT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1183 279 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 20 89 IPR041429 -
Lal5g1183 279 PANTHER INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 124 240 - -
Lal5g1183 279 PANTHER INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 1 124 - -
Lal5g1183 279 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 124 190 IPR040464 -
Lal5g1183 279 Gene3D - 121 199 - -
Lal5g1183 279 Gene3D - 1 111 - -
Lal5g1183 279 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 124 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lal5g1183 279 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 124 240 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1183 Lal-Chr5 14599643 14601034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1183 K01765 - gmx:100815703 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0539 3 3965290 3968246 Lal5g1183 5 14599643 14601034 LSH