Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0539 ATGGGCAATGAAACAGAATATGGAATTAATCATGTCATGGTGAATATGGAAATGAGGTTTTTGATAAGCATTGGGGTTTGGACAGTTGAAATTGTCAACCATTTGGATGCATTAAAACTTCAGCAAAAGCTGATCTGTGATAGAAAATCTCATAAGATATGTGATACCCTTTTGTTCTTGCAACATCCACCTACATATACTGCTGCTCTATATGGCGTGAAAGCTTGTCACGGACAAACTGGTGAGACATGGTGGTGCATCCCTTCTCAGATGGATGTAGTGAGGGGAGTGATATTGGATGAATCAGTACTCTTTGCTGAAGGTGATGATGATACAAATGTATCTTTACTACGGCAAGGAGCTGAATCTATTGTCCGAACACTTTTCCTGTCCAGAATCCATTTAGGAATTTCTTATGGCACGGGCCTTCCCATTGACAAGGTGAGCATTCTCAAAAGAATCGCAAGTTTGTACTCACTCGATTGTTTTATCTTAAATGATCCTGTAAGTGAGGTTTTGCCTGCATGGACCAATACTGATGACAGTATTGTTTATCTGGTTTCTAACAAGAAAGAGTTCTTACCTAAATTAAGGGATTGGCTGATTATTGTTCTGAAAGTTGGAGGTCAAAGTTCATGTGACACTCGAAATATGCTTCAGATTGAAAATTTAATAGAGTTGCCATTGACTATATGCCGCTTAAATAAAAGGTCAATTAAAAATGCCGTGACCGTGGGTTATATAATGAAGTCTTCTCGTGTGGAAGATTTTGCAAAGCGGGGTGCATTCCCTTTGTGTTGTACTCAAAATGGGTTGATGTTCGTGCCTCTCACTTCGGAGTTGCCTTTATCATCTCAACTAAAGGATGTTGACGTAGTTCTCCACAAAGCCACTGATGAAATATTATCTATTGAAGAGAACAAACTTACTTTTACTCAGAACATTCAAGAACTACAAAGATATTTGGAACATCACAAGGATTTCTGTGTGATTGATCCGCTGAGTAACATTTATCCTTTATTGGATCGGCTAGAAATTCAACAAGTTCTACTTGGCATGGAAGAACTGAACACTGAAGGTAGCTATTTGATAAGAGGTGCTCACTTTCTGAAAGTTGACAATTTTGATGAATTTAACTTTGCTACTAGCTTAGCTGAAGCTAGATTGTCTCTTCCATGTATAGTAAAACCAAAAGTTGCGTGTGGCGTCAGTGATGCACATAAGATGGCAATTGTCTTCAGAGTTGACGATTTTAAGAATTTAAGCGTTCCAGTCCCTGCTGTTATTCAGGAATATGTGGATCATTCATCCACTTTGTACAAATTTTATGTCTTGGGCGAGAAAATTTTCTATGCCATCAAGAAGTCGATACCAAATGCCGATATTTTGATGAAATCATCAAATGGTGATGACCTCAAACCTCTGTTGTTCGATAGCTTAAATTCTCTACCCACTGCTGACAGCATTCAGGATTACAGAGCCAATAACAGTAATAATACGACTAATAATGAGTCTATCGACCTTAAGCTGGTTACAGATGCTGCACATTGGCTTAGGAAAAAGCTTCACCTTACCATCTTTGGTTTTGATGTTGTAATTCAGGAAGGTACTCATGACCATGTGATTGTAGATGTAAACTATCTACCATCATTTAAGGAAGTACCCGATGACATATCAATACCCGCCTTCTGGGAAGCCATTAGAAATAAGTTTGACCGTGGGGCGGGCTAA 1731 0.3871 MGNETEYGINHVMVNMEMRFLISIGVWTVEIVNHLDALKLQQKLICDRKSHKICDTLLFLQHPPTYTAALYGVKACHGQTGETWWCIPSQMDVVRGVILDESVLFAEGDDDTNVSLLRQGAESIVRTLFLSRIHLGISYGTGLPIDKVSILKRIASLYSLDCFILNDPVSEVLPAWTNTDDSIVYLVSNKKEFLPKLRDWLIIVLKVGGQSSCDTRNMLQIENLIELPLTICRLNKRSIKNAVTVGYIMKSSRVEDFAKRGAFPLCCTQNGLMFVPLTSELPLSSQLKDVDVVLHKATDEILSIEENKLTFTQNIQELQRYLEHHKDFCVIDPLSNIYPLLDRLEIQQVLLGMEELNTEGSYLIRGAHFLKVDNFDEFNFATSLAEARLSLPCIVKPKVACGVSDAHKMAIVFRVDDFKNLSVPVPAVIQEYVDHSSTLYKFYVLGEKIFYAIKKSIPNADILMKSSNGDDLKPLLFDSLNSLPTADSIQDYRANNSNNTTNNESIDLKLVTDAAHWLRKKLHLTIFGFDVVIQEGTHDHVIVDVNYLPSFKEVPDDISIPAFWEAIRNKFDRGAG 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0539 576 PIRSF ITPK_unchar_domain 79 575 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lal3g0539 576 PANTHER INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 111 572 - -
Lal3g0539 576 Gene3D - 232 360 - -
Lal3g0539 576 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 245 337 IPR041429 -
Lal3g0539 576 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 379 556 IPR040464 -
Lal3g0539 576 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 384 554 - -
Lal3g0539 576 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 111 572 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lal3g0539 576 Gene3D - 373 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0539 Lal-Chr3 3965290 3968246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0539 18 67 Acyl Lipid Metabolism Gene Families AT1G04640 58.000 3.51e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0539 K01765 - gmx:100815703 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0539 3 3965290 3968246 Lal5g1183 5 14599643 14601034 LSH