Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1169 ATGGCTGCTTCACTTTCCACTGTTGCAGCTGTTAACAGAACTCCAGTGAACTTCAATGGCACTGTAGCTGGAGCAGTTCCTAGCTCAAGCTTCTTTGGAAGCAACTTGAAAAAGGTTACCTCAAGACTACCCAACACAAAAGTTTCCTCTGGAAGCTTCAAAGTTGTTGCTGTTGAAGAGATTGACCCTAAAAAGCAGACTGACAAAGATAGATGGAGGGGTCTTGCCTATGATATTTCAGATGATCAGCAAGATATCACAAGGGGTAAGGGTATGGTTGATTCCCTTTTCCAAGCTCCTCAGGATGCTGGTACACACTATGCAGTCATGAACTCTTATGAGTACATCAGCACCGGGCTTCGCCAGTACAACTTGGACAACACCAAGGATGGATTTTACATTGCCCCTGCTTTTATGGACAAGCTTGTTGTTCATGTCACCAAGAACTTTATGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATATGGGGAGGGAAAGGTCAAGGAAAATCATTCCAATGTGAGCTTGTCTTTTCCAAGATGGGAATCAACCCAATCATGATGAGTGCTGGAGAGCTGGAAAGTGGAAATGCAGGAGAGCCTGCAAAACTGATAAGGCAGAGATATCGTGAGGCGGCTGATATAATCCGGAAGGGAAAGATGTGTGCTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTCGTATGGGCGGAACGACACAATACACTGTGAACAACCAAATGGTTAATGCTACTCTCATGAACATTGCTGATAATCCAACAAATGTGCAGCTCCCTGGTATGTACAACAAAGAAGATAACCCTCGTGTGCCTATCGTTGTCACGGGTAACGATTTCTCAACATTGTATGCTCCTCTTATCCGTGACGGGCGTATGGAGAAGTTCTACTGGGCACCTACAAGGGATGACCGTATTGGTGTCTGCAAAGGAATTTTCCGCCACGACAATATTGCCGAGGATGACATTGTCAAGATTGTTGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGTGCACTCCGGGCCCGAGTTTATGACGACGAAGTGAGGAAGTGGATTGGCGGTGTCGGTGTTGATGGCATTGGGAAAAAGCTTGTGAACTCAAAGGAAGGACCTCCAACCTTTGAGCAACCAAAGATGACATTGGAGAAACTCTTAGGATATGGTAACATGCTTGTCCAAGAACAAGACAATGTGAAGAGAGTCCAATTAGCAGACAAGTACTTGAATGAGGCTGCACTTGGTAATGCTAATGAAGATTCTATCAAAAGTGGTTCTTTCTTCAAATCCTAA 1320 0.4492 MAASLSTVAAVNRTPVNFNGTVAGAVPSSSFFGSNLKKVTSRLPNTKVSSGSFKVVAVEEIDPKKQTDKDRWRGLAYDISDDQQDITRGKGMVDSLFQAPQDAGTHYAVMNSYEYISTGLRQYNLDNTKDGFYIAPAFMDKLVVHVTKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFRHDNIAEDDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWIGGVGVDGIGKKLVNSKEGPPTFEQPKMTLEKLLGYGNMLVQEQDNVKRVQLADKYLNEAALGNANEDSIKSGSFFKS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1169 439 Pfam ATPase family associated with various cellular activities (AAA) 164 305 IPR003959 GO:0005524|GO:0016887
Lal5g1169 439 Gene3D - 309 421 - -
Lal5g1169 439 Gene3D - 124 308 IPR027417 -
Lal5g1169 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 333 IPR027417 -
Lal5g1169 439 PANTHER - 1 437 IPR044960 -
Lal5g1169 439 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1169 Lal-Chr5 14406204 14410893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1169 - - gmx:100818034 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1169 5 14406204 14410893 Lal5g1169 5 14406204 14410893 ECH
Lal5g1169 5 14406204 14410893 Lal18g1336 18 15815051 15822641 LSH