Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1168 ATGGCTTCTGTTAGGGAAGTTGGGGTGCCTGAATTCATGCAGAGTAATTTCAGGCAATCTTCGTTTTTAAGGAAGAAGTTTGAGATACAGAGGAATAGGATTGGTTTCCATTGGCCTACACTTATTTATAGGAAACGGGTATTCCGTTCAGCCTTTAAAGCTTTCTCTTTAAGGTACCATGCTCAGGAAAATCTTAGGGCTGTTGTTTCCGGCAGTGCGAGCAGTTCCGTTGATGACAAATCTGGATTGGTTGAGAAGCCTGGTTTTGAAGTGATTCATTTGTATCGTGTTCCGTTTATACAAGAAAGTGCGGCTGATGAACTTCTCAGGGGAGCTCAAACAAAAATCTCAAATCAGATTGTGGACTTGCAGACCGAGCAATGTTATAATGTTGGCATTGCTTCATCGCTTTCTAGCAGCCAGCTTTTGGTTCTTAAATGGCTTCTTGGAGAAACATTTGAGCCTGAAAATCTGGGAACTGAGAGTTTTCTTGAGAAGAAAAGGAAAGAGGGTTTGAATACAGTTATTGTAGAGGTTGGGCCCAGGTTGTCGTTTACTACGGCATGGTCTTCTAATGCTGTGGCAATTTGCCAAGCATGTGGATTAACAGAAGTGACTCGTTTGGAAAGATCGAGGAGGTACTTGTTGTATACCACTAGCGAATTACAAGATCATGAAATCAATGAATTTGCTTCTATGGTGCATGATAGGATGACCGAATGTGTTTATACACAGAAGCTAACATCCTTTGAGACCAATGTTGTTCCAGAGGAAATTCGCTACATACCTGTCATGGAGAGGGGACGTAAGGCATTAGAAGAGATTAACCAGGAAATGGGTTTAGCCTTTGATGATCAGGATCTAGAATACTACACTAAACTGTTCAGAGAAGATATCAGGCGTAATCCAAGTAATGTGGAGTTGTTTGATATTGCACAGTCCAACAGTGAGCATAGCAGGCACTGGTTTTTTACTGGAAAGATATTCATTGATGGGCAGCCAGTGAATAAGACTCTTATGCAAATTGTGAAAAGTACTCTGCAGGCAAATCCAAATAACTCAGTTATTGGCTTCAAGGATAACTCAAGTGCAATCAAGGGCTTTCCAGTAAAGCACTTGCGACCAGTTCAGCCTGGTTCAGCATGTCCATTAAACATAACAGCGCGTGAGTTAGATATATTATTTACAGCTGAAACACATAATTTTCCTTGTGCAGTAGCACCTTATCCTGGCGCAGAGACAGGTGCAGGGGGTCGCATTAGGGATACCCATGCAACAGGGAGGGGGTCCTTTGTCCAGGCAGCTACAGCTGGTTATTGTGTTGGGAATCTCAATGCACCAGAGTTTTACGCTCCATGGGAAGACCCATCATTTACCTATCCATCAAATTTGGCATCACCTTTGCAAATTCTTATTGATGCTAGCAATGGTGCATCTGACTATGGTAATAAATTTGGAGAGCCGTTGATCCAAGGATTCTGTAGAACTTTTGGAATGAGACTTCCTAGTGGGGATAGGCGGGAATGGTTGAAGCCAATCATGTTTAGTGCAGGCATTGGGCAGATTGATCACCATCATATATCAAAGGGAGAGCCTGACATTGGAATGTTGGTTGTTAAGATTGGAGGCCCTGCTTATCGTATTGGGATGGGAGGTGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATCTTGCAGAGCTCGATTTCAATGCTGTGCAACGTGGGGATGCTGAGATGGCACAAAAACTGTACCGTCTTGTTCGTGCTTGCATTGAGATGGGAGAAAACAATCCAATTATCAGCATTCATGACCAGGGAGCTGGTGGGAACTGCAATGTTGTAAAGGAAATTATATACCCAAAAGGTGCAGAGATAGATATTCGAAAAATTGTGGTTGGTGACCATACAATGTCTGTTCTAGAAATTTGGGGTGCAGAGTATCAAGAGCAAGATGCCATCTTGGTGAAGCCTGAAAGTCACGAGCTCTTACAATCAATATGTGAAAGGGAAAAGGTTTCAATGGCTGTGATTGGAACCATTAGTGGTGATGGACGTATTGTTTTAGTTGACGGCTTAGAAACTCAGAAGTGTCTCTCAAGTGGACTCCCTCCACCTCCCCCCGCTGTGGATCTTGAACTGGAGAAAGTCCTAGGTGACATGCCTCAGAAGTCTTTCAAATTTCAGCGGGTTGTTTATGAGCGAGAACCACTTGACATTGCTCCTGGGGTCACAGTAATGGATTCTCTGAAGAGGGTTTTGAGTTTACCATCTGTCTGTTCAAAACGCTTCTTAACAACAAAAGTTGATAGGTGTGTTACGGGTCTTGTGGCGCAGCAGCAAACAGTTGGCCCTTTGCAGATTCCCCTTGCTGATGTTGCTGTTACAGCTCAGACTTTTACTGATGTGACTGGAGGTGCATGTGCTATTGGAGAGCAAGCAATCAAAGGGTTGTTAGACCCCAAGGCAATGGCTCGGTTGGCTGTTGGAGAAGCCCTCACAAATCTGGTATGGGCAAAGGTTACTTCCCTTTCTGATGTCAAGGCAAGTGGAAATTGGATGTATGCTGCCAAGCTTGACGGGGAAGGTGCTGCCATGTATGATGCTGCTATATCTTTGTCTGAATCAATGATTGAACTTGGCATTGCTATTGATGGAGGGAAAGACAGTCTCTCTATGGCAGCCCATGCTGGAGGAGAAGTTGTCAAGGCTCCAGGAAATCTTGTAATTAGTGTGTATGTTACTTGTCCTGATATTACAAAAACAGTGACACCAGATTTAAAACTTGAAGATGATGGTATTTTGCTTCATATTGATTTGTCAAAGGGAAACCGACGTTTAGGTGGTTCTGCTCTTGCCCAGGCATTTGACCAAGTTGGGGATGAGTGCCCTGATCTTGATGATATTCCTTACCTTAAAAAGGTCTTTGAAGGTGTTCAAGACCTTCTTACAGATGAACTGATCTCTGCTGGTCATGACATCAGTGATGGTGGGCTGTTAGTTTGTGCCTTGGAGATGGCATTTGCTGGTAATCGTGGATTTACTTTGGACTTGGCTTCACAAGGCAATAGCCTTTTCCAAACACTCTATGCAGAAGAGCTTGGGTTAGTTCTTGAGGTAAGCCAGAAAAATCTGGCTATTGTAATGGATAAATTGAACAGTGTGGGAGTCTCGGCTGAGATCATAGGACATGTAACTGTCACACCAACAGTTGAAGTCAAGGTTGATGGGGTAACCTTTTTAAAGGAAGAAACTACTATCCTTAGGGACATGTGGGAAGACACTAGTTTTCAGCTGGAAAAGTTCCAAAGATTGCCAGCTTGTGTGGATATGGAGAGAGAAGGACTACAACATCGTTATGAGCCCAAGTGGGAACTGTCCTTCACTCCTTCCTTTACTGATGACAAATATTTGTCTGCTACGTTAAAACCTAAAGTAGCTGTGATTAGGGAAGAAGGAAGCAATGGAGACAGAGAGATGGCTGCTGCATTTCATGCTGCTGGTTTTGAACCATGGGATGTTACCATGTCAGACCTTCTTAATGGAAAGATATCTTTGGAATCGTTCCGTGGAATCGTGTTTGTTGGTGGATTTAGCTATGCTGATGTGCTTGATTCTGCAAAAGGTTGGTCTGCTTGCATAAGATTCAAGGAGCCCCTCTTGGAACAATTTAATGAGTTTTACAAGCGTCCCAACACTTTCAGTCTTGGTGTATGCAATGGGTGTCAGCTAATGGCATTGTTGGGATGGATACCGGGCCCTCAAGTTGGAGGTGTGCTCGGCGCTGGTGGTGACCTCTCACAACCAAGGTTCATTCACAATGAATCAGGGCGGTTTGAATGTCGTTTTACTAGTGTGACAATAAAGGACTCACCAGCTATAATGTTCAAAGGTATGGAAGATAGTACATTGGGGGTTTGGGCCGCTCACGGTGAGGGAAGAGCTTATTTCCCAGATGAAGGTGTGTTGGATCGCATAGTTCATTCAGAGTTAGCTCCTCTGAGATATTGCGATGATGGTGGCAATCCGACAGAAACATATCCCTTTAACATGAATGGCTCTCCTTTAGGTGTAGCCGCTATTTGTTCTCCCGATGGTAGGCATCTTGCCATGATGCCTCACCCAGAGCGTTGCTTCTTAATGTGGCAGTTTCCATGGTATCCAAAGCAGTGGGATGTGGAAAAGAAGGGGCCTAGTCCGTGGTTGCGCATGTTCCAGAACGCAAGAGAGTGGTGTTCCTGA 4239 0.4418 MASVREVGVPEFMQSNFRQSSFLRKKFEIQRNRIGFHWPTLIYRKRVFRSAFKAFSLRYHAQENLRAVVSGSASSSVDDKSGLVEKPGFEVIHLYRVPFIQESAADELLRGAQTKISNQIVDLQTEQCYNVGIASSLSSSQLLVLKWLLGETFEPENLGTESFLEKKRKEGLNTVIVEVGPRLSFTTAWSSNAVAICQACGLTEVTRLERSRRYLLYTTSELQDHEINEFASMVHDRMTECVYTQKLTSFETNVVPEEIRYIPVMERGRKALEEINQEMGLAFDDQDLEYYTKLFREDIRRNPSNVELFDIAQSNSEHSRHWFFTGKIFIDGQPVNKTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKHLRPVQPGSACPLNITARELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNAPEFYAPWEDPSFTYPSNLASPLQILIDASNGASDYGNKFGEPLIQGFCRTFGMRLPSGDRREWLKPIMFSAGIGQIDHHHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNLAELDFNAVQRGDAEMAQKLYRLVRACIEMGENNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRKIVVGDHTMSVLEIWGAEYQEQDAILVKPESHELLQSICEREKVSMAVIGTISGDGRIVLVDGLETQKCLSSGLPPPPPAVDLELEKVLGDMPQKSFKFQRVVYEREPLDIAPGVTVMDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDVTGGACAIGEQAIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGAAMYDAAISLSESMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDDGILLHIDLSKGNRRLGGSALAQAFDQVGDECPDLDDIPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNRGFTLDLASQGNSLFQTLYAEELGLVLEVSQKNLAIVMDKLNSVGVSAEIIGHVTVTPTVEVKVDGVTFLKEETTILRDMWEDTSFQLEKFQRLPACVDMEREGLQHRYEPKWELSFTPSFTDDKYLSATLKPKVAVIREEGSNGDREMAAAFHAAGFEPWDVTMSDLLNGKISLESFRGIVFVGGFSYADVLDSAKGWSACIRFKEPLLEQFNEFYKRPNTFSLGVCNGCQLMALLGWIPGPQVGGVLGAGGDLSQPRFIHNESGRFECRFTSVTIKDSPAIMFKGMEDSTLGVWAAHGEGRAYFPDEGVLDRIVHSELAPLRYCDDGGNPTETYPFNMNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWDVEKKGPSPWLRMFQNAREWCS 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1168 1412 Gene3D - 500 698 IPR036676 -
Lal5g1168 1412 Pfam AIR synthase related protein, C-terminal domain 944 1074 IPR010918 -
Lal5g1168 1412 Pfam AIR synthase related protein, C-terminal domain 535 688 IPR010918 -
Lal5g1168 1412 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 62 1411 - -
Lal5g1168 1412 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 95 1410 IPR010073 GO:0004642|GO:0006189
Lal5g1168 1412 CDD PurL_repeat1 307 694 - -
Lal5g1168 1412 Gene3D - 730 915 IPR036921 -
Lal5g1168 1412 SMART GATase_5_2 1142 1411 - -
Lal5g1168 1412 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 127 246 IPR040707 -
Lal5g1168 1412 Pfam CobB/CobQ-like glutamine amidotransferase domain 1142 1411 - -
Lal5g1168 1412 SUPERFAMILY Class I glutamine amidotransferase-like 1140 1411 IPR029062 -
Lal5g1168 1412 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 255 316 - -
Lal5g1168 1412 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 91 1412 IPR010073 GO:0004642|GO:0006189
Lal5g1168 1412 SUPERFAMILY PurM C-terminal domain-like 930 1128 IPR036676 -
Lal5g1168 1412 Gene3D - 353 499 IPR036921 -
Lal5g1168 1412 SUPERFAMILY PurM C-terminal domain-like 532 766 IPR036676 -
Lal5g1168 1412 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 272 321 IPR041609 -
Lal5g1168 1412 SUPERFAMILY PurM N-terminal domain-like 742 923 IPR036921 -
Lal5g1168 1412 SUPERFAMILY PurM N-terminal domain-like 323 530 IPR036921 -
Lal5g1168 1412 CDD PurL_repeat2 791 1064 - -
Lal5g1168 1412 SUPERFAMILY PurS-like 92 250 IPR036604 -
Lal5g1168 1412 CDD GATase1_FGAR_AT 1145 1408 - -
Lal5g1168 1412 Gene3D - 916 1087 IPR036676 -
Lal5g1168 1412 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1144 1388 - -
Lal5g1168 1412 Gene3D - 1088 1412 IPR029062 -
Lal5g1168 1412 SUPERFAMILY FGAM synthase PurL, linker domain 255 322 - -
Lal5g1168 1412 PANTHER - 62 1411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1168 Lal-Chr5 14398607 14403908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1168 K01952 - gmx:100818572 2446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1168 5 14398607 14403908 Lal5g1168 5 14398607 14403908 ECH
Lal3g0545 3 4058588 4063678 Lal5g1168 5 14398607 14403908 LSH