Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0545 ATGGCTTCTGTTAGGGAAATTGGGGTATCCGAACTCATGCAGGGTACTTGCAGACAATCTTTGTTTTTGGGGAAAAAGTCTCAGAGGCAGAGGAGTAATTTGCTTTGGGGTACACTTTGTTATAGGAATCGGGTACTCGGTTCGACACGTAAAGCTTTGTCTTTAAGGTGCCATGCTCAGGAAAATCCTCGAGCTGTGGTTTCTAGAGGTGTGAGCAGTTCAGTAGATGTGCAATCTGGATTGTTTGAGAAGAATGCCACGGAAGTGATTCATTTGTATCGAATCCCGTTTATTCAAGAAAGTGCAGCTGCTGAACTTCTCAGGGGAGCTCAAACAAAAATCTCTAATCAGATTGTGGACTTGCAGACCGAGCAGTGTTATAATATCGGCGTTCTTTCACAGCTTTCTAGCGACAAGCTTGCGGTCTTAAAATGGCTTCTTGGAGAAACATTTGAGCCCGAGAATCTGGGATCTGAGAGTTTTCTTGAGAAGAAGAGCAAAGAGGGTTTGGAAAAAGTTATTGTAGAGGTTGGGCCCAGGTTGTCGTTTACCACGGCATGGTCTTCCAATGCTGTGGCAATTTGCCAGGCGTGTGGTTTGACGGAAGTGACTCGTTTGGAAAGATCAAGGAGGTACTTGTTATACACTACTGGTGAATTAGAAGATAATCAAATCAATGAATTTGCATCTATGGTGCATGATAGGATGACTGAATGTGTTTATACTCAGAAGCTAACATCCTTTGAGACCAGTGTAGTTCCCGAGGAAATTCGCTACATACCTGTTATGGAGAGGGGACGAAAGGCATTAGAAGATATTAATCAGGAGATGGGTTTAGCTTTTGATGACCAGGATCTAGAATACTACACTAAACTTTTCAGAGAAGATATCAGGCGTAATCCAACAAATGTGGAGTTGTTTGATATTGCACAGTCCAACAGTGAGCATAGCAGGCACTGGTTTTTTACTGGAAAGATATTCATTGATGGGCAGCCCGTGAATAGGACTCTTATGCAAATTGTGAAAAGTACTTTACAAGCAAATCCAAATAACTCAGTCATTGGCTTCAAGGATAACTCAAGTGCGATAAAGGGTTTTCCAGTAAAGCATTTGCGACCGGTTCAGCCTGGTTCAGCATGTCCGTTGGACATAACAACGCGTGAGTTAGATATATTATTTACAGCTGAAACACATAATTTCCCATGTGCAGTGGCGCCTTATCCTGGTGCAGAGACAGGCGCAGGAGGTCGGATTAGAGATACACATGCAACAGGAAGGGGGTCTTTCGTCCAGGCAGCTACAGCTGGTTATTGTGTTGGGAATCTCAATGCCCCAGAGTTTTCTGCTCCATGGGAAGACCCATCGTTTATTTATCCATCAAACTTGGCATCACCTTTACAAATTCTTATTGATGCTAGCAATGGTGCATCTGACTATGGTAATAAATTTGGAGAGCCATTGATCCAAGGCTTCTGTAGAACTTTTGGAATGAGACTTCCTAGTGGGGATAGGCGGGAATGGTTGAAGCCAATCATGTTTAGTGCAGGCATTGGGCAGATTGACCACCATCATATAACAAAGGGAGAGCCTGACATTGGAATGTTGGTTGTTAAGATTGGAGGCCCTGCTTATCGTATTGGAATGGGAGGTGGGGCAGCCTCAAGCATGGTCAGTGGGCAGAATCTTGCAGAGCTTGATTTCAATGCTGTGCAACGTGGGGATGCTGAGATGTCACAGAAACTGTATCGTCTTGTTCGTGCTTGCATTGAAATGGGAGATAACAATCCAATTATCAGCATTCATGATCAGGGAGCTGGTGGGAACTGCAATGTTGTAAAGGAAATTATATACCCAAAAGGTGCAGAGATAGATATCCGGAAAGTCGTGGTTGGTGATCATACGATGTCAGTTCTAGAAATTTGGGGTGCAGAATATCAGGAACAAGATGCAATCTTGGTGAAGCCTGAAAGTCATGAGCTTCTACAATCAATCTGTGAAAGGGAGAAGGTTTCAATGGCTGTAATTGGAACTATTAGTGGTGATGGACGTGTTGTTTTAGTTGACGGCTTAGCTACTCAAAAGTGTCTCTCTAGTGGACTCCCAGCACCTCCCCCTGCTGTGGATCTTGAACTAGAGAAAGTCCTCGGTGACATGCCTCAGAAATCTTTTAAATTTCATCGGGTTGTTTATGAGAGGGAACCACTTGATATTGCCCCTGGGACCACAGTAATAGATTCTCTGAAGAGGGTTTTAAGTTTACCATCTGTCTGTTCAAAACGCTTCTTAACAACAAAAGTTGATAGGTGTGTTACGGGTCTTGTGGCACAGCAGCAAACTGTTGGCCCTTTGCAGATTCCCCTTGCCGATGTTGCTGTTACAGCTCAGACTTTTACTGATGTGACTGGAGGTGCATGTGCCATTGGGGAGCAACCAATCAAAGGCCTGTTAGACCCCAAGGCAATGGCTCGGTTGGCTGTTGGAGAAGCGCTTACAAATCTTGTATGGGCGAAGGTTACTTCCCTTTCTGATGTCAAGGCAAGTGGTAATTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTGCCATGTATGACGCTGCTATATCTTTGTCAGAATCAATGATTGAACTTGGTATTGCTATTGATGGAGGGAAAGACAGCCTTTCTATGGCAGCCCATTCTGGAGGAGAAGTTGTCAAGGCTCCAGGAAATCTTGTAATTAGTGTGTATGTTACTTGTCCTGATATAACAAAAACAGTTACACCCGATTTAAAACTCGAAGATGATGGTATTTTGATTCACATTGATTTGTCGAAGGGAAAGCGGCGGTTAGGTGGATCTGCTCTTGCCCAGGCATTTGACCAAATTGGGAATGAGTGTCCTGATCTTGATGATATTCCTTACCTTAAAAAGGTCTTTGAAGGTGTTCAAGACCTTCTTACAGATGAACTGATCTCTGCTGGTCATGACATCAGTGATGGCGGGCTGTTAGTTTGTGCCTTAGAGATGGCATTTGCTGGTAATCGTGGATTTATTTTAGACTTGACCTCAAAAGGCAATAGCCTTTTCCAAATACTTTATGCAGAAGAACTTGGGTTAGTTCTTGAGGTAAGTAAGAAAAATCTGGCTATTGTAATGGATAAGTTGAACAGTGTGGGAGTTTCGGCTGAGATCATAGGCCATGTAACTGTCACACCATCAGTGGAAGTCAAGGTTGATGGGGTAACTTGTTTAAAGGACGAAACTACTATCCTTAGGGACATGTGGGAAGAAACTAGTTTTCAGCTGGAAAAGTTCCAAAGATTGCCATCCAGTGTGGATATGGAGAGAGAAGGACTAAAACATCGTTATGAGCCTAAATGGGGACTATCCTTTGCTCCTTCCTTCACTGATGAAAAATATCTGTCTGCTACTTTAAAACCTAAAGTTGCTGTGATTAGAGAAGAAGGAAGCAATGGAGACAGAGAGATGGCTGCTGCATTTCATGCTGCTGGTTTTGAACCATGGGATGTTACCATGTCTGACCTTCTTAATGGAAAGATATCTTTACAAGAGTTCCGTGGAATTGTATTTGTTGGTGGATTCAGCTACGCGGATGTGCTTGATTCTGCAAAAGGTTGGTCTGCTTGCATAAGATTCAACGAACCCCTCCTAAAACAATTTAACGACTTTTACAAGCGTCCCAACACTTTCAGTCTTGGTGTATGCAATGGCTGTCAGCTGATGGCACTGTTGGGATGGGTACCAGGACCTCAAGTTGGGGGTGTGCTTGGTGCTGGTGGTGACTTCTCACAACCCAGGTTCATTCACAATGAATCAGGTCGGTTTGAATGCCGGTTTACAAGTGTTACAATAAAGGACTCACCAGCTATAATGTTCAAAGGTATGGAAGGCAGTACATTGGGGGTTTGGGCTGCTCACGCCGAGGGAAGAGCTTATTTCCCAGATGAAGGTGTGTTGGAACGAATAGTTCAGTCAGAGTTAGCTCCTATTAGATATTGTGATGATGGTGGAAATCCGACCGAAACATATCCTTTTAATGTGAATGGCTCTCCTTTAGGTGTAGCGGCTATTTGTTCTCCAGACGGTAGGCATCTAGCCATGATGCCTCACCCAGAGCGTTGCTTCTTAATGTGGCAGTTCCCATGGTATCCGAAGCAGTGGAACGTGGAGAAGACAGGGCCTAGTCCATGGTTGCGTATGTTCCAGAACGCAAGAGAGTGGTGTTCCTGA 4233 0.4403 MASVREIGVSELMQGTCRQSLFLGKKSQRQRSNLLWGTLCYRNRVLGSTRKALSLRCHAQENPRAVVSRGVSSSVDVQSGLFEKNATEVIHLYRIPFIQESAAAELLRGAQTKISNQIVDLQTEQCYNIGVLSQLSSDKLAVLKWLLGETFEPENLGSESFLEKKSKEGLEKVIVEVGPRLSFTTAWSSNAVAICQACGLTEVTRLERSRRYLLYTTGELEDNQINEFASMVHDRMTECVYTQKLTSFETSVVPEEIRYIPVMERGRKALEDINQEMGLAFDDQDLEYYTKLFREDIRRNPTNVELFDIAQSNSEHSRHWFFTGKIFIDGQPVNRTLMQIVKSTLQANPNNSVIGFKDNSSAIKGFPVKHLRPVQPGSACPLDITTRELDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNAPEFSAPWEDPSFIYPSNLASPLQILIDASNGASDYGNKFGEPLIQGFCRTFGMRLPSGDRREWLKPIMFSAGIGQIDHHHITKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNLAELDFNAVQRGDAEMSQKLYRLVRACIEMGDNNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRKVVVGDHTMSVLEIWGAEYQEQDAILVKPESHELLQSICEREKVSMAVIGTISGDGRVVLVDGLATQKCLSSGLPAPPPAVDLELEKVLGDMPQKSFKFHRVVYEREPLDIAPGTTVIDSLKRVLSLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVTAQTFTDVTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGAAMYDAAISLSESMIELGIAIDGGKDSLSMAAHSGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDDGILIHIDLSKGKRRLGGSALAQAFDQIGNECPDLDDIPYLKKVFEGVQDLLTDELISAGHDISDGGLLVCALEMAFAGNRGFILDLTSKGNSLFQILYAEELGLVLEVSKKNLAIVMDKLNSVGVSAEIIGHVTVTPSVEVKVDGVTCLKDETTILRDMWEETSFQLEKFQRLPSSVDMEREGLKHRYEPKWGLSFAPSFTDEKYLSATLKPKVAVIREEGSNGDREMAAAFHAAGFEPWDVTMSDLLNGKISLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEPLLKQFNDFYKRPNTFSLGVCNGCQLMALLGWVPGPQVGGVLGAGGDFSQPRFIHNESGRFECRFTSVTIKDSPAIMFKGMEGSTLGVWAAHAEGRAYFPDEGVLERIVQSELAPIRYCDDGGNPTETYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWNVEKTGPSPWLRMFQNAREWCS 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0545 1410 CDD GATase1_FGAR_AT 1143 1406 - -
Lal3g0545 1410 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 89 1410 IPR010073 GO:0004642|GO:0006189
Lal3g0545 1410 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1142 1386 - -
Lal3g0545 1410 SUPERFAMILY PurM C-terminal domain-like 928 1122 IPR036676 -
Lal3g0545 1410 PANTHER - 60 1409 - -
Lal3g0545 1410 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 253 314 - -
Lal3g0545 1410 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 270 319 IPR041609 -
Lal3g0545 1410 SUPERFAMILY PurM C-terminal domain-like 530 764 IPR036676 -
Lal3g0545 1410 Gene3D - 351 497 IPR036921 -
Lal3g0545 1410 SUPERFAMILY PurM N-terminal domain-like 742 921 IPR036921 -
Lal3g0545 1410 Gene3D - 915 1084 IPR036676 -
Lal3g0545 1410 SUPERFAMILY PurM N-terminal domain-like 321 528 IPR036921 -
Lal3g0545 1410 SMART GATase_5_2 1140 1409 - -
Lal3g0545 1410 CDD PurL_repeat2 789 1062 - -
Lal3g0545 1410 SUPERFAMILY PurS-like 90 248 IPR036604 -
Lal3g0545 1410 SUPERFAMILY FGAM synthase PurL, linker domain 253 320 - -
Lal3g0545 1410 Pfam CobB/CobQ-like glutamine amidotransferase domain 1140 1409 - -
Lal3g0545 1410 Gene3D - 1085 1410 IPR029062 -
Lal3g0545 1410 Pfam AIR synthase related protein, C-terminal domain 943 1072 IPR010918 -
Lal3g0545 1410 Pfam AIR synthase related protein, C-terminal domain 533 686 IPR010918 -
Lal3g0545 1410 CDD PurL_repeat1 305 689 - -
Lal3g0545 1410 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 60 1409 - -
Lal3g0545 1410 Gene3D - 728 913 IPR036921 -
Lal3g0545 1410 SUPERFAMILY Class I glutamine amidotransferase-like 1138 1409 IPR029062 -
Lal3g0545 1410 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 126 244 IPR040707 -
Lal3g0545 1410 Gene3D - 498 696 IPR036676 -
Lal3g0545 1410 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 93 1408 IPR010073 GO:0004642|GO:0006189
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0545 Lal-Chr3 4058588 4063678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0545 K01952 - gmx:100794589 2470.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0545 3 4058588 4063678 Lal3g0545 3 4058588 4063678 ECH
Lal3g0545 3 4058588 4063678 Lal5g1168 5 14398607 14403908 LSH