Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1167 ATGGGACATATAAAGATGCAAATGCAAACCGGTCTGAATGCAATAGAGGATCAATCTGAACAATGCGGTGCTGGATATCCTAACAAAACTACTATAGCATGCATGATCAACGCAGAAATTGGTGCTGTTTTGGCAGTTATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGACCAATCAGAACACTTTCTTGTTCAGTCGTTGAAGGCATTAAGGAGACAAATTTTCTCATGGCAGAATCAATGGCATACCATCAACCCTATGTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACTGGTGCACCAATTACTGGTGTTGCTCTTTCATCTGTTTACAAGATCCTAACTCTGGATATGATTGACCAGAAAACTGTCAATGTTGTGGATACCATGCATTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAAGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATATTACAAGTTCTTCTAGCATGTGTGAAAAGTAAAGCATCTGTAGTACTGTGTAACCAACACATTTGCACCATAGTAAATACTTGTTTCCGCATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAGCGGATAGCACGGTACACAATGCATGAACTTGTTAGATGTATATTCTCTCATCTTCAGGATATGGACAACACAAAGCGTGATTTGATAAACGGGAGCACTTCTATAAAACAAGAGGCTAGTGGGCTAAACAATGTGCATGCTTCAGAAAGCAGCCAATTGGAAAATGGGAACCTGAATCCTATATATGATGATCAGCCATTATCCACAGGCATTGCTTCCAGTACTGCAAGTGTTGTGACAGAAACTGTAATGGATGGAAACACAGCTATAGCTATCAGTGGTAAGGAGACTGATCCACATGAATTGCTTGCCATGACAGAACCTTATGGGGTTCCCTGTATGGTGGAAATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATGTGGGAATAAATCCTAGATCAAACACAATTGCATATGATGAAGATGTGCCTCTTTTTGCACTGACACTGATTAATTCAGCCATAGAGTTGGGAGGACCCTCCTTTCGCCGTCACCCAAGATTGTTGAGCTTAATTCAAGATGAGTTATTCCAAAATCTTATGCAATTCGGTTTGTCAACGAGTCCTCTTGTACTTTCAATGGTGTGTAGCATTGTTCTCAATTTGTATCACCATCTTCGTACGGAACTCAAACTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGGGCTTCATATCAGCAACAGGAAGCTGCCATGGAGGCCCTTGTTGATTTCTGCAGACAAAAAACTTTCATGGTGGAGATGTATGCTAACTTTGATTGTGACATAACTTGCAGTAATGTCTTCGAAGAAGTTGCTAATTTATTGTCCAGAAGTGCATTTCCTGTGAACAATCCATTGTCTTCCATGCATATTCTTGCTTTGGATGGTCTCATTGCTGTCATGCAGGGAATGGCTGAAAGGATAGGCACTGGATCTGTAAGTTCAGAACATTCTCTTTTGAATTTTGAAGAGTATACACCATTCTGGATGGAAAAGTGTGAAAATTTTGATGATCCAAAAGATTGGATTCCTTTTGTCTGCCGAAGGAAGTGCTTCAAGAGAAGATTGATGGTTGGAGCTGATCACTTCAATCGTGATGTTAAAAAGGGTCTTGAGTTTCTCCAAGTAACACATCTTTTGCCTGATAAACTCGATCCCCAAAGTGTTGCCTGCTTTTTAAGATACACTGTTGGGCTGGATAAAAATCTCATCGGTGATTTCCTAGGAAATCATGATGAATTCTGTGTTGAGGTTCTTCATGAGTTTGCTAGAACATTTGATTTCCAAGACATGACCTTAGACACAGCCCTGCGTCTATTTTTGGAGAGTTTTAGGCTTCCTGGAGAATCACAGAAGATACATAGGGTCCTCGAAGCTTTCTCTGAGAGATATTATGAGCAGTCACAACATATCCTAGCTAACAAGGATGCTGCTCTTGTTTTATCATACTCAATTATAATGCTTAATACAGATCATCACAATGTGCAGGTTAAAAAGAAGATGACAGAAGGGGATTTTATCAGGAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCAAGAATTCTTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCGCACGACCCCTGAACCAGGTTTCGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGATGTACAAATCAAAGAAAACTACTCCATTCATTGTATCTGATTCCAGAGCCCACCTTGATTATGATATGTTTGTTATATTGTCAGGTCCAACAATTGCTGCCATTTCTGTTGTATTTGATAATGCTGAAAATGAAGAGGTATACCAAATATGTTTTGATGGATTCTTAGCTCTTGCAAAGATATCAGCTTTCTATCATCTTGAAAATGTACTCAATGATCTGGTTGTGTGTCTCTGTAAGTTCACCATTTTGGATCCATTACCAGTGGATGAATCTGTCCTTGCCTTTGGTGAAGACACAAAAGCAAAAATGGCAACTGAGACAGTTTTCACTATTGCAAATAACTATGGTGATTACATCTGCACAGGGTGGAGGAATATTCTTGATTGCATCTTAAGGTTCCACAAGTTAGGCCTTCTTCCTACTCGTTTGGCCAGTGATGTTGTTGATGAGTTAGATATTTCTACAGAAAATGGACGCGAGAAGCACAATTCGAGTTCGTTCTCGTTAAGTCGTCCTCCGTCCATTAGTACTCCAAAGAGATCCTCAGGGTTGATGAGCAGGTTCAGTCAATTTTTATATTTTGGCACTGAAGAGCCAAGATCAATACCAACTGAAGAACAACTTGTTGCTCATCAGCAAGCCATGCAAACAATTCAGAAGTGTCATGTCGACAACATATTTACTGAGAGTAAATTTCTACAAGCTGGATCTCTAATGCAGCTTGCGAGAGCACTCATTAATGCTGGAGCGCGACCTCCTAACGGGAACATCATACATGAGGATGAGGAAATTTCAGTTTTCTGCCTGGACTTACTGATAGCAATCACTCTAAATAACAGGGATAGAATTGAACTTCTCTGGAAAGTTGTTTATGAGCACATATCCAACATTGTTCAGTCAACTGTGATGCCTTGTGCCTTGGTAGAAAGGGCTATTTTTGGACTTCTAAGGATTTGCCATCGCTTGCTTCCCTACAAAGAGAACATAGCTGATGAACTTTTGAAGTCTTTGCAACTTGTCTTGAAGCTTGATGCACGTGTTGCAGATGCATACTACGAACAGATTACACAGGAAGTTAGCCGCCTTGTGAAGGCAAATGCTTCTCATATAAGATCTCAGTTAGGATGGCGGACAATTACATCACTGCTTTCCATCACTGCTAGACACCTGGAATCAGCTGAGGCTGGATTTGACACACTATCGTTCATTATGTCTGATGGAACCTACTTGCTTCCTTCGAATTATATTCTCTGTATAGATGCTGCGAGGCAGTTTGCTGAGTCTCATGTAGGACAGATAGAGCGGTCTGTAATTGCACTAGATCATATGGCAGCTTCTGTACATTGTTTAGAAAAGTGGACTCATGATGCTAAGCAGGCAGCTAAAGAAGAGGAAGTGGAAAAGATGTTGCAGGATATTGGGGAAATGTGGTTGAGGCTAGTGCACGGCCTAAGGAAAGTATGTTTGGATCAGAGAGAGGAGGTTAGAAATCATGCGTTGTTATCTTTGCAGAAATGCTTGATAGGATCTGTTGGGATTCATATCCCACCTGATTTATGGTTACAGTGTTATGATCAAGCGATCTTCACTTTGGTGGATGACTTGCTTGAAATTGCTCAGGCATACTCTCAAAAGGACTACCGAAACATAGAAGGAACACTTATTCTTGCCTTGAAGATCTTGTCTAAAGTTCAACTCCAGTTAGTCCAAGAACTATCACAGTTGCCAGACTTCTGCAAACTATGGCTAGGTGTGTTAAGCCGTATGGAAAGTTATATGAAGGTGAAAGTTAGGGGTAGGAGAAGTGAGAAACTTCAAGAGCTTGTGCCCGAGCTTCTGAAGAACACTTTGCTTGTTTTGAAATCAGGAGGCATACTAGAGCAGAGCAGTGGCTCAGATGGAAATAGTTTGTGGGAACTGACATGGTTACACGTGAAGAATATTGCTCCATCGTTGGAGTCCGAGGTGTTCCCTGAGCAAGACACAGCATTTGCAGCACAAATAGATTGA 4329 0.4061 MGHIKMQMQTGLNAIEDQSEQCGAGYPNKTTIACMINAEIGAVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKALRRQIFSWQNQWHTINPMLYLQPFLDVIQSDETGAPITGVALSSVYKILTLDMIDQKTVNVVDTMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVVLCNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQDMDNTKRDLINGSTSIKQEASGLNNVHASESSQLENGNLNPIYDDQPLSTGIASSTASVVTETVMDGNTAIAISGKETDPHELLAMTEPYGVPCMVEIFHFLCSLLNVVEHVGINPRSNTIAYDEDVPLFALTLINSAIELGGPSFRRHPRLLSLIQDELFQNLMQFGLSTSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEAAMEALVDFCRQKTFMVEMYANFDCDITCSNVFEEVANLLSRSAFPVNNPLSSMHILALDGLIAVMQGMAERIGTGSVSSEHSLLNFEEYTPFWMEKCENFDDPKDWIPFVCRRKCFKRRLMVGADHFNRDVKKGLEFLQVTHLLPDKLDPQSVACFLRYTVGLDKNLIGDFLGNHDEFCVEVLHEFARTFDFQDMTLDTALRLFLESFRLPGESQKIHRVLEAFSERYYEQSQHILANKDAALVLSYSIIMLNTDHHNVQVKKKMTEGDFIRNNRHINGGNDLPQEFLSEIYHSICKNEIRTTPEPGFGFPEMTPSRWISLMYKSKKTTPFIVSDSRAHLDYDMFVILSGPTIAAISVVFDNAENEEVYQICFDGFLALAKISAFYHLENVLNDLVVCLCKFTILDPLPVDESVLAFGEDTKAKMATETVFTIANNYGDYICTGWRNILDCILRFHKLGLLPTRLASDVVDELDISTENGREKHNSSSFSLSRPPSISTPKRSSGLMSRFSQFLYFGTEEPRSIPTEEQLVAHQQAMQTIQKCHVDNIFTESKFLQAGSLMQLARALINAGARPPNGNIIHEDEEISVFCLDLLIAITLNNRDRIELLWKVVYEHISNIVQSTVMPCALVERAIFGLLRICHRLLPYKENIADELLKSLQLVLKLDARVADAYYEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHLESAEAGFDTLSFIMSDGTYLLPSNYILCIDAARQFAESHVGQIERSVIALDHMAASVHCLEKWTHDAKQAAKEEEVEKMLQDIGEMWLRLVHGLRKVCLDQREEVRNHALLSLQKCLIGSVGIHIPPDLWLQCYDQAIFTLVDDLLEIAQAYSQKDYRNIEGTLILALKILSKVQLQLVQELSQLPDFCKLWLGVLSRMESYMKVKVRGRRSEKLQELVPELLKNTLLVLKSGGILEQSSGSDGNSLWELTWLHVKNIAPSLESEVFPEQDTAFAAQID 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1167 1442 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1436 - -
Lal5g1167 1442 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1436 - -
Lal5g1167 1442 Gene3D - 561 643 - -
Lal5g1167 1442 Gene3D - 644 758 IPR023394 -
Lal5g1167 1442 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Lal5g1167 1442 MobiDBLite consensus disorder prediction 931 955 - -
Lal5g1167 1442 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Lal5g1167 1442 SUPERFAMILY ARM repeat 76 1388 IPR016024 -
Lal5g1167 1442 SUPERFAMILY Sec7 domain 566 753 IPR035999 GO:0005085|GO:0032012
Lal5g1167 1442 MobiDBLite consensus disorder prediction 933 955 - -
Lal5g1167 1442 ProSiteProfiles SEC7 domain profile. 568 749 IPR000904 GO:0005085|GO:0032012
Lal5g1167 1442 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Lal5g1167 1442 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1167 Lal-Chr5 14379090 14388179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1167 K18443 - gmx:100784083 2340.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1167 5 14379090 14388179 Lal18g1338 18 15831065 15838129 LSH
Lal18g1338 18 15831065 15838129 Lal5g1167 5 14379090 14388179 PCT