Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1338 ATGGGACATCTAGAGTCGCATACGCGAACTGGTATCAACGCAGTAGGAGAGGAAAATGGGCATATCGATGCTGGATATCCTAAGACAACCACTGTTGCATGCATTATCAATGCCGAAATTGGTGCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTTTGAAGTCATTAAGGAGGCAAATTTTTTCATGGCAGAATCAGTGGCATGGAATCAGCCCGGCTTTGTATCTCCAGCCTTTTCTCGATGTGATTCAATCAGACGAAACTGGTGCACCCATTACTGGTGTTGCTCTGTCTTCTGTTTACAAAATCTTAACTCTGGATGTAATTGATCAAAACACTGTTAAGGTTGGGGATGCCATGCACTTGGTTGTTGATGCTGTCACAAGTTGCAGATTCGAGGTGACTGATCCTGGATCCGAAGAAGTGGTATTAATGAAGATACTACAAGTTCTTCTAGCTTGTGTGAAAAGTAAAGCATCTTTAATGTTGAGTAACCATCATATTTGCACCATAGTGAATACTTGTTTCCGTATCGTTCATCAAGCAGGAACGAAAGGTGAGTTGTTGCAGCGGATAGCCCGTTACACAATGCATGAACTTGTTCGGTGTATTTTCTCTCACCTTCCAGATATTAACAGCACAGTGCATGCATTGGTAAATGGGAGCAGTACTTTAAAACAAGAGACTGGTGGGCTAAATGATGAACAAAATTCTGCAAGTGTACAATTGGAGAATGGGAGCTTGAATTCTGTAAGTGATGGTGAACCCTTATCTACAGGTATTGTTTCCAGTACTGTTGGTGTTGTGACAGCAGCCGTTGTGGATGAAAACACAGCTATTGCTAGCAACGGCAAGGAGACTGATCTGCTTGAATTGCAGACCACTACTGGACCATATGGTATTCCCTGCATGGTGGAAATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATATGGGAATGAATCCTCGATCAAACACAATAGCATTTGATGAAGACGTGCCTCTTTTTGCCTTAACTTTGATAAATTCAGCCATAGAGTTAGGAGGGCCCTCTTTTCAACTACATCCTAGATTGCTGAGTTTAATTCAGGATGAATTATTCCACAATCTTGTGCAATTCGGTTTGTCAATGAGTCCCCTTGTACTTTCAATGGTGTGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAGTATGGAGCTTCATTTCAGCAACAGGAAGTTGCCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAGACATTCACATTGGAGATGTATGCCAACTTCGACTGTGACTTAACATGCAGTAATGTATTTGAAGACATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAGTCCACTGTCTTCAATGCATGTTCTTGCTTTGGATGGTCTTATTGCTGTCATACAGGGAATAGCTGAAAGGATAGGCAATGGATCTTTAAGTTCAGAAAATTTTGCTGTGAATCTTGAAGAGTATACTCCATTCTGGCTGGAAAAGTGTGAAAATTTCAGTGATCCAAATAATTGGGTTCCTTTTGTTTGCCGAAGAAAGTACTTCAAGAAAAGGTTGATGATTGGAGCTGATCATTTTAATCGTGATATTAAGAAAGGCCTTGAGTTTCTCCAAGGAACACATCTCTTACCTGACAAACTTGATCCCCAAAGTGTTGCATGGTTATTCAGATACACTCCTGGGCTAGATAAGAATCTCATTGGTGATTACCTAGGAAACCATGACGAATTCTGCGTTCAGGTTCTTCATGAATTCGCTAGAACATTTGATTTCAAAGACATGACATTGGACAACGCACTGCGGTTATTTTTGGAGACTTTCAGACTACCTGGAGAATCACAGAAGATACAGAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTTGCCTCATATCCTTGCCAACAAGGATGCTGCTCTCTTGTTATCATACTCTATTATAATGCTTAATACAGATCGTCACAATGCGCAGGTCAAGAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCGAATAAATGGTGGCAATGATCTACCTCGAGAATACCTGTCAGGTCTTTACCATTCAATCTGTAAGAATGAGATCCGCACAACTCGTGAGCAAAGTTCTGGATTTCCTGAAATGACTTCAAGTAGGTGGATTTATGTCATGCACAAGTCAAAAATCTCTGCTCCATTCATTGTTTCTGATTCCAGAGCATACCTCGATTATGATATGTGTGCTATGTTGTCTGGTCCTACAATTGCTGCAATTTCTGTGGTATTTGATAATGCTGAAAATGAGGAGGTATACCAAACGTGTATGGATGGATTCTTAGCTGTTGCGAAGATATCAGCTCACTATCATCTTGAAAATGCACTGGATGATTTGGTTGTGTCTCTTTGTAAGTTCGTTACTATTTTGGATCCATTATCTGTGGAGGAGTCAATCCTAGCCTTTGCAGATGACAAAAAAGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCGAATATGCATGGTGATTACATCCGCACTGGGTGGAGGAATATTCTTGACTGTATCTTAAGATTGCACAAATTAGGCCTTCTTCCTGCTCGTATGACCAGTGATGCGGCTGAGCAGTCAGAGCTTTCTACAGAAACTAGTCATGGGAAACAAAACACTAATTCTTTATCTTCAACCCATCTTCCATCTGTTAGTACTCCGAAGAGATCCTTGGGATTAATGAGCAGATTTAGTCAACTCTTATATCTTGGAGCTGAAGAGCCAAGATCAGTACCGACTGAAGAAGAACTTGCTGCTCAGCAGTGCGCTCTTCAAACAATACAAAAGTGTCACATTGACAGCATATTCACCAAGAGTAAATATTTGAAGCCTGAATCTCTATTGCAGCTTTCAAGAGCACTGATTGGTGCAGGAGAGCGACCTAAGAAAGGGTACAGAACTTCTGAGGATGAAGATACTTCAGTTTTCTGCCTGGAGTTACTTGTGGCAACCACTCTGAATAATAGGGATAGGGTTGAACTTCTTTGGCAGGGTCTTTATGAGCACATATCCAATATTGTTCAGTCAACTGTGATACCATGTGCACTGGTAGAGAAGGCTGTTTTTGGACTCTTGAGGATTTGCCACCGGTTACTTCCCTACAAAGAGAACATTACTGAAGAACTTTTGAGGTCCCTTCAACTTGTCCTAAAGCTTGATGCACGTGTTGCTGATGAATATTATGAACAGATTACACAAGAAGTCAATCACCTTCTGAAGGCAAATGCTTCTCATATTAGATCTCAGTTAGGATGGCGGAGTATTACGTCACTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAGGCCGGATTTGATGCGCTATTGTTCATTATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGTGTGGATGCTGCAAAGCAGTTTGCTGAGTCTCGTGTTGGAGAGGTAGAGCGGTCTGTAATGGCACTTGATCTTATGGTAGGGTCTGTCGCTTGTTTAGAAAAGTGGACCAGTGATGCTAAGCAAGAATTGAAAGAAGAGGAAGTGGAAAAGATATTGCAGGATATTGGAGACATGTGGTTGAGGCTTGTACATGGACTAAGTAAACTATGCTTGGACCAGAGAGAGGAGGTTAGAAACCATGCATTGTTATCACTGCACAATTGCTTGACAGGATCGGTTGGGATACATCTCCCACATGATTTGTGGTTACAATGTTTTGATCAAGTGATCTTCACTGTGGTTGATGAGCTGCTTGAAATTTCGCAGACACGGTCTCAAAAGGACTACAGGAACATGGAAGGAACACTTGTTCTTGCCTTGAAGCTCTTATGTAAAGTTTTCCTCCAGTTACTCCAAGACCTATCGCAGTTGACAGACTTCAGCAAATTATGGTTGGGTGTACTAAGTCGGTTGGAAATATATATGAAGTTAAAAATTAGGGGAAGGAGAAGCGAGAAGATTCAAGAGCTTGTGCCTGAACTTCTTAAGAACACTTTGCTTGTTATGAAAGCAGGGGTCATACTAGTGCGGAGTAGTAGTGTAGATGGAAATAGTTTGTGGGAATTGACATGGCAGCACATAGATAACATTGCCCCGTCATTGCAGTCTGAAGTGTTCCCCGAGCAAGATTCAGAGGATTTGCAGCACAAACAATCTGAAACAGTTGGCAGTTTGGGGCCTGTTGAAAACATTTCTGTTCCTTCAAATGGAACTGTGGTCCAAGATGGTGGCGCTGGTGATGGTTAA 4422 0.4141 MGHLESHTRTGINAVGEENGHIDAGYPKTTTVACIINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKSLRRQIFSWQNQWHGISPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVKVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASLMLSNHHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLPDINSTVHALVNGSSTLKQETGGLNDEQNSASVQLENGSLNSVSDGEPLSTGIVSSTVGVVTAAVVDENTAIASNGKETDLLELQTTTGPYGIPCMVEIFHFLCSLLNVVEHMGMNPRSNTIAFDEDVPLFALTLINSAIELGGPSFQLHPRLLSLIQDELFHNLVQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASFQQQEVAMEALVDFCRQKTFTLEMYANFDCDLTCSNVFEDIANLLSKSAFPVNSPLSSMHVLALDGLIAVIQGIAERIGNGSLSSENFAVNLEEYTPFWLEKCENFSDPNNWVPFVCRRKYFKKRLMIGADHFNRDIKKGLEFLQGTHLLPDKLDPQSVAWLFRYTPGLDKNLIGDYLGNHDEFCVQVLHEFARTFDFKDMTLDNALRLFLETFRLPGESQKIQRVLEAFSERYYEQLPHILANKDAALLLSYSIIMLNTDRHNAQVKKKMTEEDFIRNNRRINGGNDLPREYLSGLYHSICKNEIRTTREQSSGFPEMTSSRWIYVMHKSKISAPFIVSDSRAYLDYDMCAMLSGPTIAAISVVFDNAENEEVYQTCMDGFLAVAKISAHYHLENALDDLVVSLCKFVTILDPLSVEESILAFADDKKARMATETVFTIANMHGDYIRTGWRNILDCILRLHKLGLLPARMTSDAAEQSELSTETSHGKQNTNSLSSTHLPSVSTPKRSLGLMSRFSQLLYLGAEEPRSVPTEEELAAQQCALQTIQKCHIDSIFTKSKYLKPESLLQLSRALIGAGERPKKGYRTSEDEDTSVFCLELLVATTLNNRDRVELLWQGLYEHISNIVQSTVIPCALVEKAVFGLLRICHRLLPYKENITEELLRSLQLVLKLDARVADEYYEQITQEVNHLLKANASHIRSQLGWRSITSLLSITARHLEASEAGFDALLFIMSDGAHLLPANYVLCVDAAKQFAESRVGEVERSVMALDLMVGSVACLEKWTSDAKQELKEEEVEKILQDIGDMWLRLVHGLSKLCLDQREEVRNHALLSLHNCLTGSVGIHLPHDLWLQCFDQVIFTVVDELLEISQTRSQKDYRNMEGTLVLALKLLCKVFLQLLQDLSQLTDFSKLWLGVLSRLEIYMKLKIRGRRSEKIQELVPELLKNTLLVMKAGVILVRSSSVDGNSLWELTWQHIDNIAPSLQSEVFPEQDSEDLQHKQSETVGSLGPVENISVPSNGTVVQDGGAGDG 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1338 1473 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Lal18g1338 1473 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Lal18g1338 1473 Gene3D - 644 761 IPR023394 -
Lal18g1338 1473 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Lal18g1338 1473 MobiDBLite consensus disorder prediction 1443 1464 - -
Lal18g1338 1473 SUPERFAMILY ARM repeat 352 1343 IPR016024 -
Lal18g1338 1473 MobiDBLite consensus disorder prediction 923 952 - -
Lal18g1338 1473 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Lal18g1338 1473 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Lal18g1338 1473 SUPERFAMILY Sec7 domain 565 758 IPR035999 GO:0005085|GO:0032012
Lal18g1338 1473 MobiDBLite consensus disorder prediction 1434 1473 - -
Lal18g1338 1473 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1460 - -
Lal18g1338 1473 Gene3D - 561 643 - -
Lal18g1338 1473 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1338 Lal-Chr18 15831065 15838129 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1338 K18443 - gmx:100784083 2458.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1167 5 14379090 14388179 Lal18g1338 18 15831065 15838129 LSH
Lal18g1338 18 15831065 15838129 Lal5g1167 5 14379090 14388179 PCT
Lal18g1338 18 15831065 15838129 Lal18g1338 18 15831065 15838129 PCT