Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1150 ATGGATGCTTTGTCTAAGAAGAGTGAAAATTTTCAAAAGGAAAAAGATGGGGTGAGGTCAAGGTGTGGTAATAATGGAGCTAAGAGTGAGTGCTTAACTGATTCCAATGCAGAATCTAGAGATACCAGTTTCAGTGGATCAAGCTCCTCAGGTTCCACTGAAGTAGCAAAAGCTATAGGGTCTTCTTCTTGTTCTTCTCCTCCTTCTCTTGGTTGGCCTATTCTAAAAGCTACAGTCTCCAAGTGCTTGAAATCTGATGAGAAAGAAAACCAACATAAGCCCCACTTGATGGAAGATGCAAAATTTAGTACTATCAATCCAAAAATTTCTGAAATTGATATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCAAATGCTATTACTAATCTTTGTGCCACTGTATTTGGGCAATTGTGGAGACTAGAACCTCTACCTTGTGAAAAGAAGGCAATGTGGCAGAGAGAGATGGAATGGTTTGTTAGTGTTTGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATGCCCTGATGGAAGCAAGGTTGAGGTAATGTCATGCAGGCCTAGGACAGATATTTTTATCAACATACCTGCTCTTCGTAAACTCGACAACATGCTTCTCGAAATATTAGATAGTTTCACCACTACAGAGTTTTGGTATGTTGACCAAGGAATTGTTGCCCCGGACGCAGATGGTTCAGCCTCTTTTCGTAGAACGATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCTGTGCCTCGTGTTCCCCCTGCAGGTCTCAGTGAGAACTCGAGAAAGAAGTTGAATAACTCTCGAGAATGTGCACACCAAATACTAAAGGCAGCCATCTCTATCAATGACATTGTTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTAGCAGAAGCCCTTCCTAAGAACGGAAGAGCTTGCCTGGGGGATTTTATTTATCGTTACATAACATCAGATCAATTCTCCCCGGAGTGTCTGCTTGATTGCCTAGACCTCTCCTCTGAACATGTCGCACTAGAGATCGCGAATCGTGTGGAAGCTGCAATTCATGTATGGCGTAGAAAAGCTCACTCCAGACCCGCACAAACTCCCAGCCGTTCAACTACAAAGTCGTCCTGGGAGATAGTCAAGGACTATATGGCTGATGGAGATAAGAGAGAACAGCTCGCTGAAAGAGCTGAAAACATTCTACTTTCTTTGAAGCAGCGATTCCCAGGCTTAACTCAAACTACCTTGGATACAAGCAAGATTCAGTGCAACAAGGATGTTGGCAAATCCATTCTAGAGAGCTATTCAAGAGTTTTGGAGAGCATAGCCTTTAACGTTGTAGCTCGCATTGATGATTTGCTTTATGTGGATGACCTGACCAAACATTCAGATAGATGTCCACTAGCTTCACCGCAAACAGTTTCTTCACGTCGATTCTCGGTGTCTCTCTCAGGCACTCCACACAAAGCAGCAGCAATAGGCACACCTAGCTTTTCACCTAAGCCACTTATCAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCAACAAAAGTAACAATGGAATCAAACCTCAACGTCGCGGCTTTGGGGTCAGAAGAGTTTTATCAAATTATCTTGGAGCAGAGACAAAAACAAAGATATGTAGCAGTTCAATTGAGGTCAATAACTGTCCAAACCCAGGTAGCAAAAAAACATTACAACCAGAAAATCAGAAGGATTCATGTGCCTTGAAGAACAAGATAAAATGA 1803 0.4271 MDALSKKSENFQKEKDGVRSRCGNNGAKSECLTDSNAESRDTSFSGSSSSGSTEVAKAIGSSSCSSPPSLGWPILKATVSKCLKSDEKENQHKPHLMEDAKFSTINPKISEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPCEKKAMWQREMEWFVSVCDHIVELIPSWQTCPDGSKVEVMSCRPRTDIFINIPALRKLDNMLLEILDSFTTTEFWYVDQGIVAPDADGSASFRRTIQRQEEKWWLPVPRVPPAGLSENSRKKLNNSRECAHQILKAAISINDIVLAEMEVPESYLAEALPKNGRACLGDFIYRYITSDQFSPECLLDCLDLSSEHVALEIANRVEAAIHVWRRKAHSRPAQTPSRSTTKSSWEIVKDYMADGDKREQLAERAENILLSLKQRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESIAFNVVARIDDLLYVDDLTKHSDRCPLASPQTVSSRRFSVSLSGTPHKAAAIGTPSFSPKPLISPARGERTPFLNKSNNGIKPQRRGFGVRRVLSNYLGAETKTKICSSSIEVNNCPNPGSKKTLQPENQKDSCALKNKIK 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1150 600 MobiDBLite consensus disorder prediction 1 67 - -
Lal5g1150 600 Gene3D PRONE domain, subdomain 1 104 343 - -
Lal5g1150 600 Gene3D PRONE domain, subdomain 1 344 484 - -
Lal5g1150 600 MobiDBLite consensus disorder prediction 576 600 - -
Lal5g1150 600 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 32 571 - -
Lal5g1150 600 Coils Coil 1 21 - -
Lal5g1150 600 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 32 571 IPR038937 GO:0005085
Lal5g1150 600 MobiDBLite consensus disorder prediction 1 21 - -
Lal5g1150 600 ProSiteProfiles PRONE domain profile. 102 485 IPR005512 GO:0005085
Lal5g1150 600 MobiDBLite consensus disorder prediction 576 592 - -
Lal5g1150 600 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 110 479 IPR005512 GO:0005085
Lal5g1150 600 MobiDBLite consensus disorder prediction 26 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1150 Lal-Chr5 14241837 14246216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1150 - - gmx:100780972 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0252 22 1575131 1578526 Lal5g1150 5 14241837 14246216 ECH
Lal5g1150 5 14241837 14246216 Lal5g1150 5 14241837 14246216 ECH
Lal5g1150 5 14241837 14246216 Lal22g0252 22 1575131 1578526 PCT
Lal22g0252 22 1575131 1578526 Lal5g1150 5 14241837 14246216 PCT