Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0252 ATGGAGGCTTTATGCAACAAAGATGAAAATTTTCATAAGAAAAGAGATGGGTTTCGGTCTTGTGGTGCTAAGAACAAGTCCATCAATGGTTCCAGTTTGGGGAGTAGAGAAACAAGTTCCAGTGGATCGTGTTCATCACATTCCACTGAAAAAGTAAAAACAGCAAAAGGGTCTTCTTCTCCAACTCCTCTTGGTTGGCCTATTCGGAAGGCTGCAGTCTCCAAATGCAGCAAATCAGATGAAAAAGAAAATCATCATTCTCAGTTGGACTCGGATGGTACTAAATTTACCACTATAAGATCAAAAGTTTCAGGAAAATTTGTTGGAACAGAGATTGATATGATGAAGGAAAGGTTTGCAAAATTACTACTTGGTGAAGACATGTCAGGAAGTGGAAAAGGGGTCTGTACTGCTATGGCCATCTCAAATGCTATTACTAATCTGTGTGCCACTGTATTTGGGAAATTATGGAGACTAGAACCTCTGCCTTGTGAAAAGAAAGAAATGTGGCGAAGAGAGATGGACTGGCTACTTTGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAAACATTTCCTGATGGAAGTAAGCTAGAGGTAATGACTTGCAGGCCCAGGTCAGATATTTTTATCAATCTTCCAGCTCTTCATAAACTTGACAACATGCTTCTTGAAATTTTAGACAGTTTCACTGCTACAGATTTTTGGTATGTTGACCAAGGAATTGTAGCCCCAGAAGCAGACGGATCAGCCTCTTTTCGCAGAAGAATTCAGCGGCAAGAGGAGAAGTGGTGGCTCCCTGTACCGCGTGTTCCCCCTGCTGGTCTCAGTGACAAATCGAGAATTCAGTTGAATCACACAAGAGAATGTACAAACCAAATACTAAAAGCTGCCATGGCTATCAACAGCACTGCTTTAGCTGAAATGGAAGTTCCCGAGTCATATTTGGAAGCCCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTATTTATCGCTACATCACATCAGACCAATTCTCTCATGAGTGCTTGCTTGATTGCCTAGACCTCTCTTCTGAACATGTTGCACTAGAGATTGCGAACCGTGTTGAAGCCTCAATTTATGTATGGCGTCGAAGAGCACACTCAAGAGCCCCACCTAATGCGAACCGTTCTACTACAAAGTCATCCTGGGAAATGGTCAAGGACTTCATGGCAGATGGAGATAAGAGAGAATTGCTTGCCGAAAGAGCTGAAAACATTTTACTTTCATTGAAGCAAAGATTCCCCGATTTAACTCAAACTACCCTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATACTAGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCACGTATAGATGATTTGCTATATGTAGATGACTTGACAAAACATTCAGATAGGTTTCCATTGGTTCCAAAAGTTAATATGGTTTCTCAGCAGATAGTGTCACATTCAATAGCAGTGTCTGTCTCAGGCACTCCACACAAACCAGCTGTTATTACACCTAGATTTTCACCTGCACCACTAATTAGTCCTGCAAGGGGAGGAGACAGAACTCCTTTCTCCACAACCAACAACAACATCGTTGTCGTCAAACCTCAACATCGTCGTGGCTTTGGGGTGAGGAGAGTATTGTCAAATTATCTCGGAGTAGAGACAAAAACTACAAAGATATTTACCAATTCAACTGAGGTGAATTGTTCAAACACAAGTAACAATAAAGTACAACTGCCAGAACTTAAGAAGGAACCACATGCCATGAAAAACAAGACAAAATGA 1824 0.4123 MEALCNKDENFHKKRDGFRSCGAKNKSINGSSLGSRETSSSGSCSSHSTEKVKTAKGSSSPTPLGWPIRKAAVSKCSKSDEKENHHSQLDSDGTKFTTIRSKVSGKFVGTEIDMMKERFAKLLLGEDMSGSGKGVCTAMAISNAITNLCATVFGKLWRLEPLPCEKKEMWRREMDWLLCVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDIFINLPALHKLDNMLLEILDSFTATDFWYVDQGIVAPEADGSASFRRRIQRQEEKWWLPVPRVPPAGLSDKSRIQLNHTRECTNQILKAAMAINSTALAEMEVPESYLEALPKNGRTCLGDFIYRYITSDQFSHECLLDCLDLSSEHVALEIANRVEASIYVWRRRAHSRAPPNANRSTTKSSWEMVKDFMADGDKRELLAERAENILLSLKQRFPDLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPKVNMVSQQIVSHSIAVSVSGTPHKPAVITPRFSPAPLISPARGGDRTPFSTTNNNIVVVKPQHRRGFGVRRVLSNYLGVETKTTKIFTNSTEVNCSNTSNNKVQLPELKKEPHAMKNKTK 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0252 607 MobiDBLite consensus disorder prediction 1 67 - -
Lal22g0252 607 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 14 579 - -
Lal22g0252 607 MobiDBLite consensus disorder prediction 24 61 - -
Lal22g0252 607 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 14 579 IPR038937 GO:0005085
Lal22g0252 607 MobiDBLite consensus disorder prediction 1 21 - -
Lal22g0252 607 MobiDBLite consensus disorder prediction 582 607 - -
Lal22g0252 607 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 111 478 IPR005512 GO:0005085
Lal22g0252 607 ProSiteProfiles PRONE domain profile. 102 484 IPR005512 GO:0005085
Lal22g0252 607 Gene3D PRONE domain, subdomain 1 106 344 - -
Lal22g0252 607 Gene3D PRONE domain, subdomain 1 345 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0252 Lal-Chr22 1575131 1578526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0252 - - gmx:100780972 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0252 22 1575131 1578526 Lal5g1150 5 14241837 14246216 ECH
Lal22g0252 22 1575131 1578526 Lal22g0252 22 1575131 1578526 ECH
Lal5g1150 5 14241837 14246216 Lal22g0252 22 1575131 1578526 PCT
Lal22g0252 22 1575131 1578526 Lal5g1150 5 14241837 14246216 PCT