Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1139 ATGAAGGATTCAACCCGTTTCTTCACGATCGGGTTAATAGCATCATGGTACTCCTCAAATATTGGAGTACTACTATTGAACAAGTATCTTCTCAGCAACTATGGGTTTAAGTACCCAATATTCCTCACCATGTGTCACATGATAGCATGTTCTTTATTTAGCTACGTTGCAATAGCGTGGCTAAAGTTGGTGCCAATGCAAACGATTCGATCAAGTGTTCAGTTTTTCAAGATCTTGGGTTTAAGTCTTATTTTCTGTGTCTCTGTAGTGTTTGGGAATGTGTCGCTTAGGTACCTTCCTGTGTCGTTTAATCAGGCTATTGGTTCTACTACGCCTTTCTTCACTGCCGTTTTTGCTTATCTTATGACGTTTAAGAAGGAGGCTTGGATTACTTATCTAACGCTTGTTCCTGTTGTTACTGGTGTTGTCATTGCTAGTGGGGGTGAACCGAGTTTCCATTTATTTGGATTCATAGTATGTATTGCGGCTACAGCTGCAAGGGCTCTAAAATCAGTGCTGCAAGGAATTTTACTATCTTCTGAAGGAGAGAAATTGAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCCACACTTATAATGGAAGAAAATGTGGTTGGTATCACAGTGGCTCTTGCAAAAGATGATGTTAAGATAATTTGGTATCTCCTATTCAATTCAGCACTAGCATATTTTGTCAACGTCACCAATTTTTTGGTCACAAAACATACCAGTGCTCTTACCCTTCAGGTACTTGGAAATGCTAAGGGGGCTGTAGCTGTAGTGGTTTCAATTCTAATATTTAGGAATCCAGTATCAGTCACTGGAATGATGGGTTACACACTCACAGTATTTGGAGTTGTTCTTTACAGTGAAGCCAAAAAGCGAAGCAAGTGA 921 0.4007 MKDSTRFFTIGLIASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMIACSLFSYVAIAWLKLVPMQTIRSSVQFFKILGLSLIFCVSVVFGNVSLRYLPVSFNQAIGSTTPFFTAVFAYLMTFKKEAWITYLTLVPVVTGVVIASGGEPSFHLFGFIVCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITVALAKDDVKIIWYLLFNSALAYFVNVTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYTLTVFGVVLYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1139 306 PANTHER - 4 305 - -
Lal5g1139 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
Lal5g1139 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
Lal5g1139 306 PANTHER SOLUTE CARRIER FAMILY 35 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1139 Lal-Chr5 14104439 14109464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1139 6 306 Organic Solute Cotransporters AT3G11320 89.701 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1139 - - gmx:100806704 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1139 5 14104439 14109464 Lal5g1139 5 14104439 14109464 ECH
Lal3g0572 3 4325403 4329653 Lal5g1139 5 14104439 14109464 LSH