Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0572 ATGTGTTCCTATTCATATGCCATATTCATTTACTTTTCTCACCTTCATCTCCCACTTTTCTTTCTCTCTCTTTTGTCCAAGCTTTACTCTTGGACTTGCTTCTTCAATGGCTTCAAACATGTTTATTACTCCAGCAACTGTTGTAGTAGCTATTACTGGCATGTAGTACTATGTTGTCTAAACTCACTTACCACTCTTCTTATTCCACTACCTTTTTTTTCTTTTATGTTGTTTAACACATGTTTTTTCATATCAATCAAGCAAAATCATATGACCATGTTTTTTTTCATTGATGGGTTAATTTCAGGAAGGGTGAAACAATTGAGGGAAGTTTATGTTGCAAATTCAAGTGCTGGAACATATAAAGTGTGCTTACCTTCACTCCTTTCAAGTAAAAGGGTTGAAAGGATTCCATGGTTTGATGGAACTGCTGCATCAAATTATTCATGTGGTGATAGAAGTTCCCTAGTGAAGGTTTCTGAAGGTGGCGCTATCTCTTTCCCTCATGGTTGGAACCTTGACAAGGGCTCAGAAAACCAAATTGAAGAAAACCCAGTTCCCAAAATGAAGGGTTCAAACCGTTTCTTCACAACGGGGTTAGTAGCAGCATGGTACTCTTCCAACATTGGTGTACTCCTATTGAACAAGTATCTTCTCAGCAACTACGGATTCAAGTATCCAATCTTCCTAACCATGTGTCACATGACAGCATGTTCTATATTTAGCTACGTTGCAATAGCGTGGCTAAAGGTGGTGCCTTTACAACCCATTAGATCAAAGGTTCAGTTTTTGAAGATCTCTGCTCTCAGCCTCATTTTCTGTGTCTCTGTGGTTTTTGGGAATGTGTCGCTTCGGTATCTTCCTGTGTCGTTTAATCAAGCTATTGGTGCTACCACACCTTTCTTCACTGCCGTTTTTGCTTATCTTATGACGTTTAAGAGAGAGGCTTGGCTCACTTATCTCACACTTGTTCCTGTTGTTACTGGAGTCGTTATTGCCAGTGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATGATATGTATTGCAGCCACAGGTGCAAGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAATTGAATTCAATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTCCTTCTTCCTGCCTCACTCATAATGGAAGAAAATGTAATTGGCATCACAGTGGCTCTTGCTAGAAATGATGTCAAGATTATTTGGTATCTGCTATTCAATTCATCACTTGCATATTTTGTCAACATTGCCAATTTTTTGGTCACAAAACATACCAGTGCTCTGACTCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCGGTAGTGGTTTCAATTCTAATATTTAGAAACCCAGTCTCCGTTACTGGAATGATGGGTTATGCGCTGACAGTATTTGGGGTTGTACTTTATAGCGAAGCCAAAAAGCAAAGCAAGTAA 1485 0.3973 MCSYSYAIFIYFSHLHLPLFFLSLLSKLYSWTCFFNGFKHVYYSSNCCSSYYWHVVLCCLNSLTTLLIPLPFFSFMLFNTCFFISIKQNHMTMFFFIDGLISGRVKQLREVYVANSSAGTYKVCLPSLLSSKRVERIPWFDGTAASNYSCGDRSSLVKVSEGGAISFPHGWNLDKGSENQIEENPVPKMKGSNRFFTTGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSIFSYVAIAWLKVVPLQPIRSKVQFLKISALSLIFCVSVVFGNVSLRYLPVSFNQAIGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFMICIAATGARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPASLIMEENVIGITVALARNDVKIIWYLLFNSSLAYFVNIANFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYALTVFGVVLYSEAKKQSK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0572 494 Pfam Triose-phosphate Transporter family 200 487 IPR004853 -
Lal3g0572 494 PANTHER SOLUTE CARRIER FAMILY 35 123 493 - -
Lal3g0572 494 PANTHER - 123 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0572 Lal-Chr3 4325403 4329653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0572 188 494 Organic Solute Cotransporters AT3G11320 86.645 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0572 - - gmx:100785614 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0572 3 4325403 4329653 Lal11g0640 11 5433682 5445082 ECH
Lal3g0572 3 4325403 4329653 Lal3g0572 3 4325403 4329653 ECH
Lal3g0572 3 4325403 4329653 Lal5g1139 5 14104439 14109464 LSH