Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0857 ATGGTATATGAAGCGCGCAATAAGGATAACACAACATCAGGAGCACTCAGGTTCTCTCTGGATTCCCCTCTAGCGGAGCGAACGGAAAACCATCAGGCTCTAGCAACCGGAACATCCTACAACCCACATACCTCGGAGCATTCGGAATGGCAAACCAAGATTAAAATATGGGAAGATCACATGAGACAACCACTTGTGGTGTTAAGACCACATGATGGGAATCCTGTCTTTTCTGCTACATTTTTACCTGCTCCATACCGGCCTGATCATATTGTCCTTATCACTGGAGGCCCACAAAATCGTGAGGTAAAACTATGGGTCTCATCATGGGACGAAGACTGGATGGTCCCAGGTGATGCTGAATCATGGAAATGCACTCAGACATTGGAGTTGAAAAGTTCAGCTCAACCATGTCTTAGGGATGCATTCTTTAATCAAATTGCAGCATTGCCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATTTATGCTCTGCATTTGCATTATGGTTCTAATCCAGAATATACTCGCATGGATTATGTAGCCGAATTTACCGTGACCATGCCCATTCTAAGTTTTACTGGGACACATGATATATCACCTCAGGGTGAGCATATTGTTCATGCTTATTGTGTTCAGACACAGGCTATTCAGCAGTATGCTTTGGATTTGGCTCTTTGTTTGCCTCCACCATTGGAAAATATGGGACTAGAGAAGTCGGGTTCCATTGTTTCCAGAGACTCATTTGCAGGTAGGACATCTGAAATGCCTTTATCCAGTTCTGCTCCCAAAACAGTGGTACAAGCAACTAGCACTGAGAGTGCACATATGGCAAAATATCCTTTTAGGTCTGACCATATTGAAGCATCCGCTTCCAAACAAAGCAGCAGTTCCAATGCTGAAGCTAAACCTGTTACATTGGCTCCATCCGGTAGTGATGCTGATATTGTTTGTGTTTCATGTCTGCCTCTTCCTTTGGGACCAAGGTTGTCTAGGAAACTTTCTGATTTTAGGAATCCACGGTCTAACTTAGGTGATCAGATTGGGGAGCAATCTTTTGATGAGTATTCAGTGGACAGACAAATGAACACTATTCATAGTAACTTGTCTGATGTACCACCATTGAACAATGATTCAAAGATTGATGAGAAGAAAGTCAAACAAAATGACATTTCTAGTGTACTTAATCCTTCTGTCATGTTTAAGCAGCCGGCTCATTTAGTTACACCGTCTGAAATCATAAAAGCTGGTTCTTCCTCTGAGACTAGTATAATTGACATAAAGAGCGACTGCGAAGCAAAAATCCAGGATTTGATTGATGTGGGTAATACTGAAGTGAAAGTGAAAGTGGTGGGTGAGGCCAATTCTGATCAAAGCACTGAATTCGATCAGCAGGGGCCACAACAATACCTATTTTCTGATAGTAAAGAAAAGTTATTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATGGCCGGTGAGAGTTTTTCAACATCTGGGGAAGCTTACATTTCAGGGGAACTTGGAGTAGTTGATTGTATTGTCCGCGACTCACTAGCCCAACCTTCTAATGTTGGTGAGGATGATCTCCATGAGGCAGAAGACATCCATAAAACTCTCTATCCTAACTCTCTTCTTCTCTTGAGAACCCATTTTTGTATTCCAAGAATGGAAAGGGGTTTGTGGGTTGACTCACGGGAACCCAAAACCCTAGAGAGAGAAAATGAGTATCAGTCCTGGGATCCTCGCTTGAGCGAGAGATTTTCGCTTGGGCGAGAGAGGTTCACCTGGGAGGGTGAAATCCTGGGCTATATTGGAGGATTCTCGCCTGAGCGAGAGTTGTCTCGCCTGGGCGAGAAATGGCATTTTGGGACTGTTGAGACTGTGAGATTCTCGCTTGAGCGAGAGGGTCAGTTCTGA 1932 0.4379 MVYEARNKDNTTSGALRFSLDSPLAERTENHQALATGTSYNPHTSEHSEWQTKIKIWEDHMRQPLVVLRPHDGNPVFSATFLPAPYRPDHIVLITGGPQNREVKLWVSSWDEDWMVPGDAESWKCTQTLELKSSAQPCLRDAFFNQIAALPHAGLLLLANAQRNAIYALHLHYGSNPEYTRMDYVAEFTVTMPILSFTGTHDISPQGEHIVHAYCVQTQAIQQYALDLALCLPPPLENMGLEKSGSIVSRDSFAGRTSEMPLSSSAPKTVVQATSTESAHMAKYPFRSDHIEASASKQSSSSNAEAKPVTLAPSGSDADIVCVSCLPLPLGPRLSRKLSDFRNPRSNLGDQIGEQSFDEYSVDRQMNTIHSNLSDVPPLNNDSKIDEKKVKQNDISSVLNPSVMFKQPAHLVTPSEIIKAGSSSETSIIDIKSDCEAKIQDLIDVGNTEVKVKVVGEANSDQSTEFDQQGPQQYLFSDSKEKLFCSQASDLGIEMAGESFSTSGEAYISGELGVVDCIVRDSLAQPSNVGEDDLHEAEDIHKTLYPNSLLLLRTHFCIPRMERGLWVDSREPKTLERENEYQSWDPRLSERFSLGRERFTWEGEILGYIGGFSPERELSRLGEKWHFGTVETVRFSLEREGQF 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0857 643 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 53 539 IPR045152 GO:0031087
Lal5g0857 643 MobiDBLite consensus disorder prediction 292 309 - -
Lal5g0857 643 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 53 539 - -
Lal5g0857 643 MobiDBLite consensus disorder prediction 292 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0857 Lal-Chr5 9772493 9778965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0857 K12616 - gmx:100798228 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0857 5 9772493 9778965 Lal11g0878 11 11421896 11433676 LSH