Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0878 ATGTCTTCCACCGGCAACCCCAACCAACCACCGTCACCTCAATCACCTTTCGATATGCACTCTTTCTTCAATCCCCCAAACTCAAACCCTAATCCTAACCATAACCATATCCATAACCATAACAATCTCCCATTCCCTCCTTCTTCTTCCTCCTCCTCCTCCTACCCTCTCCCCACCGCCCCGTTCCACCCTCACCACCCTCACTTCCTCCCATCCTTCGACCACCACCACCATCTCCAACAACAACAACAACAGCAACAGCAGCAGCAGCACCGCTCTCTCTCCTTCCCTACTCCCCCTCTCCAGCCCCAACCCATCCCCCCTCCTTCCAACCCCAACGCAGGCGCCCGTCTCATGGCCCTCCTCAGCGCCCCGCCCCAACCTTCCTCCGCCCCCGCCCCGACCCCTTTCTCCCACCCCGACTTCCCCACTGCCCCGCCCTTGGCCATGTTCACGGCCGCCAATGCTGCCGTGGGCGTGCTCAATCAGGAGCAGAGCAGTAAAATCCCTAAAGGAAGGCACCTGACAGGCGACCACGTTGTGTATGATTTGGATGCCAGACTGCCTGGTGAGGTGCAACCTCAGCTTGAGGTTACGCCCATAACGAAATATGGGTCGGATCCTAACCCGGTTTTGGGTCGACAGATTGCGGTTAATAAGTCGTATATTTGCTATGGTTTGAAGCAGGGGAACATCAGGGTGCTCAATATTCGCAACGCAGTTAGATCATTGCTGAGAGGCCATACTCTGAGGGTCACAGACTTGTCTTTCTTTGCAGAAGATGTTCATCTCTTGGCTAGTGTTGGCGCAGATGGCCGTGTCTATGTGTGGAAGATCTCTGAAGGTCCAGATGTTGAAGATAAGCCTCAAATTACTGCCGATATTGTTATTGCTATTCAAATAGTGGGAGAGGAGAATGTTGAAAATCCTCGAATTTGCTGGCACTGCCACAAACAAGAGATTTTAATAGTTGGCATGGGAAAACATGTTCTCAGAATTGACATGACAAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGAGGATCCTCCAAGATGTCCTGTTGACAAGCTCATTGATGGGGTTCAGCTTGTAGGTATCCATGATGGAGAGGTGACTGATTTGTCTATGTGCCAATGGATGAGAAATCGATTGGTATCTGCATCACAGGATGGCACGATAAAAATCTGGGAAGATCGCAAGACACAACCACTTGCGGTGTTAAGACCACATGATGGGAATCCAGTTTTTTCGGCTACATTTTTACCTGCTCCACACCGGCCTGATCACATTGTCCTTATCACTGCAGGACCACAAAATCGTGTGGTAAAACTTTGGGTCTCAGCAAGTGAAGAAGGCTGGTTGCTCCCAAGTGATGATGAATCATGGAAATGCACTCAGACGTTGGAGTTGACAAGTGCAGCTCAACCATGTCTTAGGGATGCATTCTTTAATCAAGTTGCAGCATTGTCTCATGCAGGTCTGATTTTACTTGCAAATGCCCAGAGGAATGCTATTTATGCTGTGCACTTAGAATATGGTTCTTATCCAGAATCTACACGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACACATGATATTTCACCTCAGGGTGAGCATATTGTTCAGGTTTATTGTGTTCAGACACAGGCTATTCAGCAGTATGCTTTGGATTTAGCCCTTTGTTTGCCCCCGCCATTGGAAAAGATTGGACTAGAGAAGTCGGATTCTATTGTTTCCAGAGATGCAATTACTGCTGAAGTATTCACCTCTCTAGAGTCATTTGCAGCTAGGGCGTCTGATTCGTCTTTACCCAGTTCTGCTCCCAAAACAGTGGTACAAGCAACTAGCACTGACAGTGTGCATGTGGCAAGATACCCTTTTAGCTCTGGCCATATTGAGGCACCTGCTTCTAAAGAATTCAGCACTTCCAATACTGAAGCTAAACCTGTCACACTGGCTCCATCCAGTAGTGATGCTGATATTGTTTGTGTTCCATCTCCTCCTCTTCCTTTGAGCCCCAGGCTGTCTAGGAAACTTTCTGATTTTAGGAATCCACAATCTAACTTAGGTGATCATTGTGGGGAGCAACCTGTTAATGATTATTCAGTTGACAGACAAATGGACACCATTCATAGGAACTTGTTTGATGTATCACCATTGAATAATGATTCAAAGATTGATGAAAAGAAAGTCAAACAGAATGACATTTCTGGTGTACTTAATCCTTCTGTCATGTTTAAGCAGCCGACCCATCTAGTTACACCTTCTGAAATCATTAAAGCTGGTTCTCCCTCTGAGACTAATATGATTGATAGAAAGAGTGAGGGAGAAGCAAAAATCCAGGACGTGACTGATGTGGGTAATGCTGAAGTGGAAGTGAAAGTGGTTGGTGAGGCCAGATCTAATCAATGCAATGAATTTGACCTGCAGAGGCCACAACAAAACCCACTTTCTGATAGTAAAGAAAATTTTTTTTGCTCTCAGGCTTCAGATCTTGGTATTGAGATTGCCCGAGAAAGTCGTGCAATAACTGAGGAGACTTACATTTCAGAGGAAGTTGGACAAGATGATTCTATTGTAGGGGACTCACTGACCCAACCTTCTAATGCTGGTGAGGATGGACTCCAAGAAGCAAAAGATGTCCTTGAAAAGGTTTCTGACTCGTCTACATCCATGACAGTGCCACCATCACCTGCACCTAATACCAAAGGTAAGAAACAAAAGGGAAAAAATTCTCAAGCATCAAGTCCATTTTCCCCATCTCCAAGTGTGTGCAATTTAAACGATTCATCCAATGAACCTAGTGGAAGCTCAAGCCTTCTGTCTGCGGAAAATGCTTCTCCTCAAATTCTAGCAATGCAAGAATCGCTTAATCAGTTATTGACAATGCAAAAAGAGATGCAGAAGCAATTGACAATGATGGTTGCAGTTCCAGTTACGAAAGAAGGTAGAAGGCTCGAGGCTTCTCTAGGGAGAAGCATGGAAAAAGCTGTCAAGGCCAACACTGATGCTTTGTGGTCTCGAATTCAAGAGGAGAATGCAAAAACTGAAAAGTTGTTAAGAGATCATATCCAGAATGTTACAGGTTTATTTAGTAACTTTATGAATAAGGATCTACCAACAATGTTGGAGAAAACAGTGAAGAAGGAAATGGCTTCAGTTGGGTCAGCTGTAGTCCGTTCAATCTCTCCTGCTGTGGAAAAAATAATATCTTCCACCATTGTGGAGTCATTCCAGAGAGGAGTGGGTGATAAGGCTGTGAATCAACTTGATAAATCAGTTACTTCAAAGCTTGAAGCTACTGTTGCAAGGCAAATCCAAGCACAGTTTCAGACAACCGGCAAACAGGTGCTTCAGGATGCACTCAAATCCAGTTTTGAAACATCAGTGGTTCCTGCTTTCGAGATGTCTTGCAAAGCCATGTTTGATCAAGTAAATGCTACATTTCAAAATGGCATGGCTGAACATTCATCTGCTGTTCAGCAACGTGTTGAATCTGGGCACACTTCATTGGCAATGACTCTAAGGGATTCCATTAATTCCGTGTCATCAGTGACTCAAACGTTAAATAGAGAAGTGGTAGAGGGCCAGAGAAAGCTGTTGGCACTTGCAGCTGCAAGACCAAACTCAGGCACATTAAATCCTTTAACCATACAGCTGAACAGTGGTCCTTTACTTCATGAAAAGGTTGACGTGCCACTAGATCCCACACAAGAGCTAGCAAGACTTGTATCTGAAAGGAAATATGAGGAGGCTTTCACTGCAGCTCTACAAAGAAGTGATGTTTCCATTGTTTCTTGGTTATGTTCTCAGGTTGATTTACATGGACTTTTGTCAATGGTTCCTCTCCCATTGAGCCAGGGAGTAGTGCTTTCACTTCTGCAACAGCTGGCTTGTGATATTAGCAAGGATACATCCCGAAAGACGGCTTGGATGACAGATGTCGCTGCTGCTATAAATCCGTCAGACCCGATGATTACATTGCATGTGCGACCGATCTTTGAGCAAGTCTATCAGATACTGAATCATCAACGTAGCTTGCCTACGATGACCGGAGCTGATCTCTCAAGTATCCGCCTTTTGTTGCATGTCATCAACTCTATGCGTATGACATGTAAATGA 4149 0.4517 MSSTGNPNQPPSPQSPFDMHSFFNPPNSNPNPNHNHIHNHNNLPFPPSSSSSSSYPLPTAPFHPHHPHFLPSFDHHHHLQQQQQQQQQQQHRSLSFPTPPLQPQPIPPPSNPNAGARLMALLSAPPQPSSAPAPTPFSHPDFPTAPPLAMFTAANAAVGVLNQEQSSKIPKGRHLTGDHVVYDLDARLPGEVQPQLEVTPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIRNAVRSLLRGHTLRVTDLSFFAEDVHLLASVGADGRVYVWKISEGPDVEDKPQITADIVIAIQIVGEENVENPRICWHCHKQEILIVGMGKHVLRIDMTKVGNGEAFVAEDPPRCPVDKLIDGVQLVGIHDGEVTDLSMCQWMRNRLVSASQDGTIKIWEDRKTQPLAVLRPHDGNPVFSATFLPAPHRPDHIVLITAGPQNRVVKLWVSASEEGWLLPSDDESWKCTQTLELTSAAQPCLRDAFFNQVAALSHAGLILLANAQRNAIYAVHLEYGSYPESTRMDYIAEFTVTMPILSFTGTHDISPQGEHIVQVYCVQTQAIQQYALDLALCLPPPLEKIGLEKSDSIVSRDAITAEVFTSLESFAARASDSSLPSSAPKTVVQATSTDSVHVARYPFSSGHIEAPASKEFSTSNTEAKPVTLAPSSSDADIVCVPSPPLPLSPRLSRKLSDFRNPQSNLGDHCGEQPVNDYSVDRQMDTIHRNLFDVSPLNNDSKIDEKKVKQNDISGVLNPSVMFKQPTHLVTPSEIIKAGSPSETNMIDRKSEGEAKIQDVTDVGNAEVEVKVVGEARSNQCNEFDLQRPQQNPLSDSKENFFCSQASDLGIEIARESRAITEETYISEEVGQDDSIVGDSLTQPSNAGEDGLQEAKDVLEKVSDSSTSMTVPPSPAPNTKGKKQKGKNSQASSPFSPSPSVCNLNDSSNEPSGSSSLLSAENASPQILAMQESLNQLLTMQKEMQKQLTMMVAVPVTKEGRRLEASLGRSMEKAVKANTDALWSRIQEENAKTEKLLRDHIQNVTGLFSNFMNKDLPTMLEKTVKKEMASVGSAVVRSISPAVEKIISSTIVESFQRGVGDKAVNQLDKSVTSKLEATVARQIQAQFQTTGKQVLQDALKSSFETSVVPAFEMSCKAMFDQVNATFQNGMAEHSSAVQQRVESGHTSLAMTLRDSINSVSSVTQTLNREVVEGQRKLLALAAARPNSGTLNPLTIQLNSGPLLHEKVDVPLDPTQELARLVSERKYEEAFTAALQRSDVSIVSWLCSQVDLHGLLSMVPLPLSQGVVLSLLQQLACDISKDTSRKTAWMTDVAAAINPSDPMITLHVRPIFEQVYQILNHQRSLPTMTGADLSSIRLLLHVINSMRMTCK 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0878 1382 MobiDBLite consensus disorder prediction 76 97 - -
Lal11g0878 1382 MobiDBLite consensus disorder prediction 1 116 - -
Lal11g0878 1382 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 282 - -
Lal11g0878 1382 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 197 315 IPR032401 -
Lal11g0878 1382 Pfam WD domain, G-beta repeat 367 396 IPR001680 GO:0005515
Lal11g0878 1382 MobiDBLite consensus disorder prediction 15 58 - -
Lal11g0878 1382 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 42 1382 IPR045152 GO:0031087
Lal11g0878 1382 Gene3D - 178 294 IPR015943 GO:0005515
Lal11g0878 1382 ProSiteProfiles Trp-Asp (WD) repeats profile. 364 406 IPR001680 GO:0005515
Lal11g0878 1382 SUPERFAMILY WD40 repeat-like 205 472 IPR036322 GO:0005515
Lal11g0878 1382 MobiDBLite consensus disorder prediction 856 952 - -
Lal11g0878 1382 MobiDBLite consensus disorder prediction 894 952 - -
Lal11g0878 1382 Gene3D - 1294 1382 IPR044938 -
Lal11g0878 1382 PANTHER ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN 42 1382 - -
Lal11g0878 1382 Gene3D - 298 510 IPR015943 GO:0005515
Lal11g0878 1382 MobiDBLite consensus disorder prediction 98 112 - -
Lal11g0878 1382 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 287 IPR001680 GO:0005515
Lal11g0878 1382 SMART WD40_4 360 397 IPR001680 GO:0005515
Lal11g0878 1382 SMART WD40_4 400 446 IPR001680 GO:0005515
Lal11g0878 1382 SMART WD40_4 238 278 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0878 Lal-Chr11 11421896 11433676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0878 K12616 - gmx:100798228 1961.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0878 11 11421896 11433676 Lal11g0878 11 11421896 11433676 ECH
Lal5g0857 5 9772493 9778965 Lal11g0878 11 11421896 11433676 LSH