Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0292 ATGAACAACAATGATGGAGACAATTTGGATAATCCAGAAGGTGATGGAGAGGATTTGGTTAGAGAAATACTTAGGGAAGCTATTAATTGTAATCCTTCTATAGATGATGCAAAAGAAAATGAAGATGAAGCTCCTGTAGAAAATGGTTATAGGGAGTTTAATGTGAGTGTCTCTTCTCCAATCCCATGCCCTAGCTCCATTGGCATTTGGAAACATGCAAAAGAATTGGCTGCATTAGGATATAGCGGTGAGAATTTGATTGAAGACAATTCTGATGAATCACTTGTCCAGAAATTCGAAAATTATTGGAAAGCAGTAGAGTCCACAGTAGTATGGGGAGGACAATTAGAGCTTGGAGAGTGTTTTAAATTGTTGTTATGGTCGCGATTGCGGCTTGGTGCTTTTACTCACTGCCTAAAGAAGCATATTATGATATTTTCTGGGTCCTTCCCAGATGTGGAGATGGGAAAGGAGTATAAATGTGAAGATGGTAATGGCTCCTCTAATTTGGGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGTGAGCGTTATAATTCTGTTGTCCTAATGGAGAGGCGTTATAATTCTGTTGTCCTAATGGAGAGGTTTGATTTTACTAGTTAA 633 0.3855 MNNNDGDNLDNPEGDGEDLVREILREAINCNPSIDDAKENEDEAPVENGYREFNVSVSSPIPCPSSIGIWKHAKELAALGYSGENLIEDNSDESLVQKFENYWKAVESTVVWGGQLELGECFKLLLWSRLRLGAFTHCLKKHIMIFSGSFPDVEMGKEYKCEDGNGSSNLGIMLSYHKHAFGLGERYNSVVLMERRYNSVVLMERFDFTS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0292 210 PANTHER OTU DOMAIN CONTAINING PROTEIN 88 190 - -
Lal5g0292 210 Gene3D - 14 196 - -
Lal5g0292 210 Pfam OTU-like cysteine protease 95 187 IPR003323 -
Lal5g0292 210 PANTHER DEUBIQUITINASE OTUD6B 88 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0292 Lal-Chr5 2597844 2601542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0292 K18342 - gmx:100819977 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0292 5 2597844 2601542 Lal5g0292 5 2597844 2601542 ECH
Lal5g0292 5 2597844 2601542 Lal18g0437 18 3635499 3639086 LSH