Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0437 ATGGAGGATGCTTATGAGAAGGCACATGAAGAAGTTATTTCAGACGAAGCAGTTGAGAAGAAGCACGAAACACGTGATGAAATCCTTGCACGGCACAGGAAAGAGATATCATTGCTGCAGAAGAAAGAAGTTGAAATGAAAAAGGCAGCAGCTAGAGGTAGCAAGACTGAACAAAAGGCTAAGAAGAAGCATGTGGAAGAAGAGATTTCTCAACTTTCTGCCAAGCTTAAAGAGGAACATTCAAAAGAACTAGCTGCATTAGGCTATAGCAGTGGTAATGGAAATGAAAAGAACAATTTGGACACGTTGGTGAAGGCCATAGCTGGAGTATCTGTTACTAGTCAACCTGAGAATACGAAGTCCAGCAAAGCTAAACAGAGGCGAGACAAAAAAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAACAGAGCGACATTATAAGTGATCGTATGATTGAAAATGAGAAATTGGAAAAGAAGTTGAAGCCTCTCGGTTTGACTGTTACTGAAATAAAGCCAGATGGACATTGCCTCTACAGAGCTGTTGAGGATCAGCTTTCCATCCTCTCTGGTGGTAGTTCACCTTATACATATCAAGAACTTAGAGAAATGGTGGCTGCTTATATGAGGAAGCATTCATCTGATTTCCTTCCGTTTTTCCTGTCAGAGAATCTGATTGAAGGTGATTCTGATGAATTACCTGCCCAGAAGTTCGAAAATTATTGTAAAGAAGTGGAATCCACAGCAGTATGGGGAGGACAACTGGAGCTTGGTGCTTTGACTCACTGCCTTAAAAAGCATATTTTGATATTTTCTGGGTCCTTTCCAGATGTGGAGATGGGGAAGGAGTATAAATCTGAAGATGGTACTGGCTCATATAATTTGGGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGGGAGCATTATAATTCTGTTGTCCCAACATGA 966 0.412 MEDAYEKAHEEVISDEAVEKKHETRDEILARHRKEISLLQKKEVEMKKAAARGSKTEQKAKKKHVEEEISQLSAKLKEEHSKELAALGYSSGNGNEKNNLDTLVKAIAGVSVTSQPENTKSSKAKQRRDKKAQQEAEREQRIQAEQSDIISDRMIENEKLEKKLKPLGLTVTEIKPDGHCLYRAVEDQLSILSGGSSPYTYQELREMVAAYMRKHSSDFLPFFLSENLIEGDSDELPAQKFENYCKEVESTAVWGGQLELGALTHCLKKHILIFSGSFPDVEMGKEYKSEDGTGSYNLGIMLSYHKHAFGLGEHYNSVVPT 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0437 321 MobiDBLite consensus disorder prediction 1 24 - -
Lal18g0437 321 Gene3D - 155 320 - -
Lal18g0437 321 SUPERFAMILY Cysteine proteinases 134 320 IPR038765 -
Lal18g0437 321 PANTHER OTU DOMAIN CONTAINING PROTEIN 21 320 - -
Lal18g0437 321 MobiDBLite consensus disorder prediction 121 143 - -
Lal18g0437 321 MobiDBLite consensus disorder prediction 45 77 - -
Lal18g0437 321 Pfam OTU-like cysteine protease 175 315 IPR003323 -
Lal18g0437 321 ProSiteProfiles OTU domain profile. 169 321 IPR003323 -
Lal18g0437 321 Coils Coil 55 82 - -
Lal18g0437 321 MobiDBLite consensus disorder prediction 114 143 - -
Lal18g0437 321 PANTHER DEUBIQUITINASE OTUD6B 21 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0437 Lal-Chr18 3635499 3639086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0437 K18342 - gmx:100819977 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0437 18 3635499 3639086 Lal18g0437 18 3635499 3639086 ECH
Lal5g0292 5 2597844 2601542 Lal18g0437 18 3635499 3639086 LSH