Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0228 ATGAATTTCACTAAAAGCTTTCTGCTTATTGTGTCAATCTCTTATTTTCTCCTGTCCACCAATGCGGTGCCGACAACTCGTAGCGTCATCCCATCATTCAATGCCCAAACTCCTGCAGGATCAAGGGCGGGTAGCCTAATAGGTATTAGCACGATCTTCAAGGATTCAGCCAAAACTACACAGCAAATCATTAGGGTTAGCCCTAGAGTCATTTTGTTTTGCAAAGACACTGAGAACCCTGCCCTTTGTGTTGAGACCATTGCCCCATATTTGCAAGGTGAATTTAACCCCATACTAGCCCTTGAAACTGAGATTAAGGCTACACTAAATCAAAGCTTGAAGATTTCTAATATCATTGCTCAATCACTTTCTCACCCTTCTAATGAAGCAAAAGCTGCACTTAGAATATGCAAGTCACAATATAGAAACATTGTGGATACTATAAGAGAAGCTTCAGAATTGTTGAATCAACAAAATGTGGTTGATGCATATTACAAATTTTCATCTGTTATGGCAGATAGATCTTCTTGTGAAGATGCTATTGCTGAATGTCAAGGAGTTGAAAACCCATTTTCTGAGGATTCTCAAATTATTTATCAACTTGGTGGAAATTGTTTGGCCATTTTGGATGGGATAATTAATAGGTTTCTTCAATATGTGCAATTTTTTAAGCTACAATGCAAGGAAATATAA 693 0.3766 MNFTKSFLLIVSISYFLLSTNAVPTTRSVIPSFNAQTPAGSRAGSLIGISTIFKDSAKTTQQIIRVSPRVILFCKDTENPALCVETIAPYLQGEFNPILALETEIKATLNQSLKISNIIAQSLSHPSNEAKAALRICKSQYRNIVDTIREASELLNQQNVVDAYYKFSSVMADRSSCEDAIAECQGVENPFSEDSQIIYQLGGNCLAILDGIINRFLQYVQFFKLQCKEI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0228 230 Pfam Plant invertase/pectin methylesterase inhibitor 73 208 IPR006501 GO:0004857
Lal5g0228 230 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 212 IPR035513 -
Lal5g0228 230 SMART PMEI_2 65 208 IPR006501 GO:0004857
Lal5g0228 230 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 216 - -
Lal5g0228 230 TIGRFAM PME_inhib: pectinesterase inhibitor domain 73 210 IPR006501 GO:0004857
Lal5g0228 230 CDD PMEI-like_2 67 208 - -
Lal5g0228 230 PANTHER PECTINESTERASE 1 216 - -
Lal5g0228 230 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0228 Lal-Chr5 1973950 1975473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0228 - - lang:109329138 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1385 3 19755256 19755915 Lal5g0228 5 1973950 1975473 LSH
Lal5g0228 5 1973950 1975473 Lal18g0415 18 3509013 3509587 LSH