Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1385 ATGGATTACACCAAAACCCTTCTTCTCATTGTGTCAATTATCTCTTCTCTTCTTCTATCCATCAATGCTGTGCCTACAACTAGAAGTGTTATCCCTTCATATGGTGCCTCAAGTCCTACAGCATCAAGGGCAGGTAGCCTTATAGGCCTATCCACAATCTTCAAGAATGCACAAGCCAAAGCTACACAAGTCATTAGGGTTAATCCTAAGCTTATTTCTTTTTGCAAAAACACTGAGAACCCTACCCTTTGTGCTGAGACCATTAACCCATATTTCCAAGGCCAATTTAACCCTATAGTGGCCCTTGAAACTGAGATTAAGGCTACCCTTAATCAAAGCTTGAAGGTTTCTAATATCATTGCCCAATCACTTGATCATCCATCTAAGGAATCAGTTTCTGCACTTAAGATATGCAAGTCACGATATAAAAATATTGTTCATACTATCAAGGAAGCTTTGAAATTGTTGAACCAACAAAATGTGGTTGATGCTTATTACAAGTTTTCTACTGTGATGGAAGATAGATCTTCTTGTGAGAATGCTATTACTGAATCTTCTTGTGAGAACCCTTTTGCTGAGGAATCTCTAATTGTTTATCAGCTTGGTGGAAATTGCATGGCAATTTTGGATGGGATAATTAATAATAATCTTCGTTTCTAA 660 0.3742 MDYTKTLLLIVSIISSLLLSINAVPTTRSVIPSYGASSPTASRAGSLIGLSTIFKNAQAKATQVIRVNPKLISFCKNTENPTLCAETINPYFQGQFNPIVALETEIKATLNQSLKVSNIIAQSLDHPSKESVSALKICKSRYKNIVHTIKEALKLLNQQNVVDAYYKFSTVMEDRSSCENAITESSCENPFAEESLIVYQLGGNCMAILDGIINNNLRF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1385 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 210 IPR006501 GO:0004857
Lal3g1385 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 212 IPR035513 -
Lal3g1385 219 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 215 - -
Lal3g1385 219 PANTHER PECTINESTERASE 1 215 - -
Lal3g1385 219 SMART PMEI_2 67 208 IPR006501 GO:0004857
Lal3g1385 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 212 IPR035513 -
Lal3g1385 219 CDD PMEI-like_2 68 208 - -
Lal3g1385 219 Pfam Plant invertase/pectin methylesterase inhibitor 73 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1385 Lal-Chr3 19755256 19755915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1385 - - lang:109329138 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1385 3 19755256 19755915 Lal5g0228 5 1973950 1975473 LSH
Lal3g1385 3 19755256 19755915 Lal18g0415 18 3509013 3509587 LSH