Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0221 ATGGCACCACCTGAGATAATCAAAACCGTGGCAAAACCATCTTCTACTTTCAACAACAAGCTTCCACGTCATGCTTACGTCACGTTTCTAGCGGGAAATGGTGATTACGTGAATGGTGTAATTGGTTTGGTGAAAGGGTTAAGGAAAGTGAAAAGTGAGTACCCTTTGGTTGTGGCGGTTCTGCCAGATGTACCCTTTGATCACCGTCAGATCTTGGAGGATCAGGGATGTATTGTCCGTCAGATTGAACCGGTTTATCCACCAGAGAATAAGGGTACTCAATATGCTATGGCGTATTACGTCATTAATTATTCTAAGCTTCGTATATGGGAGTTTGTAGAATACAACAAGATGATATACTTAGATGGAGACATTCAAGTGTTTGAAAACATAGATCACTTATTTGACATGCAAAATGGTAACTTTTATGCTGTTATGGATTGTTTCTGTGAAAAGACATGGAATCATACACCACAATACAAAATAGGGTATTGCCAACAATGTCCTAATAAGGTACAATGGCCTAAAGAATTAGGTCAACCACCTTCTAAGTACTTCAATGCTGGAATGTTTGTGTTTGAGCCTAGCATGGATACTTACTATGACCTATTGAAGACCCTTAAAGTTACCACTCCTACCCCTTTTGCTGAACAAGATTTCTTGAATATGTACTTTAAGGACATTTATAAGCCAATTCCTTTGGTTTATAACCTTGTTCTTGCTATGTTGTGGCGTCACCCTGAGAATGTGGACCTTGATAAAGTTAAGGTTGTTCACTATTGTGCAGCGGGTTCAAAGCCATGGAGATATACAGGGAAAGAAGAGAATATGCAAAGAGAGGATATAAAAATGTTAGTGAAGAAATGGTGGAACATTTACAATGATGATTCCCTTGATTACAAGAAATCATTGAATGTGACTGAAGGGTCAAATAATAATGATGGTGTTGACATTGAAACATTCTCACAGGTTCTATCAGTAGTTGGAAATGTTCAATATGTAACAGCACCTTCAGCTGCTTAG 1023 0.3842 MAPPEIIKTVAKPSSTFNNKLPRHAYVTFLAGNGDYVNGVIGLVKGLRKVKSEYPLVVAVLPDVPFDHRQILEDQGCIVRQIEPVYPPENKGTQYAMAYYVINYSKLRIWEFVEYNKMIYLDGDIQVFENIDHLFDMQNGNFYAVMDCFCEKTWNHTPQYKIGYCQQCPNKVQWPKELGQPPSKYFNAGMFVFEPSMDTYYDLLKTLKVTTPTPFAEQDFLNMYFKDIYKPIPLVYNLVLAMLWRHPENVDLDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWNIYNDDSLDYKKSLNVTEGSNNNDGVDIETFSQVLSVVGNVQYVTAPSAA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0221 340 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 299 IPR029044 -
Lal5g0221 340 PANTHER GALACTINOL SYNTHASE 1 1 340 - -
Lal5g0221 340 CDD GT8_Glycogenin 24 295 - -
Lal5g0221 340 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 301 IPR029044 -
Lal5g0221 340 Pfam Glycosyl transferase family 8 28 271 IPR002495 GO:0016757
Lal5g0221 340 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0221 Lal-Chr5 1890492 1895114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0221 4 340 Glycosyltransferase AT1G56600 72.189 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0221 K18819 - gmx:100809287 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0221 5 1890492 1895114 Lal5g0221 5 1890492 1895114 ECH
Lal3g1400 3 19922252 19925332 Lal5g0221 5 1890492 1895114 LSH