Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0192 ATGCTACGATTGAAAGCGTTTCGACCTACGAGTGATAAAATCGTGAAGATTCAATTGCATCCAACGCATCCATGGATGGTAACTGCTGATGTTTCTGATCGTGTTTCCGTTTGGAATTGGGAACATCATCAGGTCATATATGAGTTGAAAGCTGGTGGAGTTGATGAGCGACGTTTGGTTGGTGTCAAATTGGAGAAGCTAGCAGAGGGAGAAACAGAGTCCAAAGGAAAACCCACAGAATCCATTCGTGGAGGAAGTGTTAAGCAGGTGGCTTTTTATGATGATGATATATGCTTTTGGCAACATTGGCATAATCGTTCTTCAGCTGCAGAGGCTCCAACAGGTGTCCATACATCATCTTTTAGTTCTCCTGCCCCATCGACAAAAGGGAGGCATTTTCTTGTTATATGTTGTTTAAAAAAAGCTATATTTTTGGATTTGGTGACGATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTATGCATGGAGTTCCTTTATACATCTGGCATTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATTAGAGTTATCTCAATGATCACATGGAAGCTTGTGCGAAGATACTCTGGAGGTCATAAAGGATCAATCTCTTGCTTGATGTCCTTCATGGCTTCTTCTGGTGAGTCTCTCCTGGTTTCTGGTGCTAGTGATGGACTGCTCATACTTTGGAGTGCTGACTATGGAAAAAATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGCGGAGTTGTGGCAGTTGAGCTATCTAGGGTGATAGGTGGTGCTCCTCAGCTAATTACAATTGGTGCAGATAAGACATTAGCTATATGGGACACAATCTCCTTTAAGGAGCTACGGCGTCTAAAGCCAGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCACCCTCGAGCTCCAAACCTTGATATTCTAACTTGCGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACCTATTCTGCTCTTACAAGGCCATTGTGTGAATTGACCACAGTTATTCCTCCACAAGCTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGCATGGTTGCACATACTTTGCAGCCACATCTTGTTGCTACTGGAACCAATATTGGTGTTATTATCTGCGAATTTGATCCTAGATCTCTTCCACCTGTAGCTCTGCTACCAACCCCGTCAGACAGCAGAGAGCATTCTGCAGTATTTGTAATTGAAAGAGAACTAAAGCTATTAAATTTTCAGTTAAACAACTCAGCAAATCCATCTCTTGGAAACAGTAGTTCCTTTTCAGAAACAGGAAGATCCAAGGGAGATTCTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCGCATTAGTACACATGTTCCTCATGATTCATATTCAGTTCTTTCTGTCAGCAATTCAGGAAAGTACCTTGCAATAGTTTGGCCAGATATTCCATATTTCTCAATCTACAAGGTTAATGATTGGTCAGTTGTTGACTCTGGCAGTGCAAGGCTTCTTGCTTGGGATACATGTCGTGACAGATTTGCTATATTGGAATCATTAGTACCTCCTAGAATTCCTGTAGTTCTCAAGGGTAGCTCATCAAAAAGAGCGAAAGAAGCCGCTGCAGCACAAGCAGCAGCAGCAGCTTTTGCTGCTGCTGCCTCTTCCTCTGCTTCTGTTCAAGCCTGCATCTTGTTAGATGATGGAAGATCAAATGTACTAATGAAGTCTGTTGGTGCACGCAGTGAACCAGTCATTGGTCTGCATGGAGGGGCTCTGCTTGGTGTTGCCTATCGAACATCTAAGAGAGTCAGTCCTATTGCTGCTTCAGTTATTTCAACAATCCAGTCCATGCCCTTATCAGGCTATGGGGGCAGTGGTCTTTCTTCCTTTACTCCTTACGATGATGGATTTTCTTCTCATAGACCATCTGAGGCGGCACCACAAAACTTCCAGCTTTACAGTTGGGAGACATTCCAGCCTGTGGGTGGCCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACTGTCGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTGTTTGCGCCCACAATATAGATACCTGGGAGACGTTGCAATCCCCTATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTTGTTACACCAACTACTGTAGAAATTGTGTTTGTGGATGCTGGGGTTGCACAAATTGATATTGAAAGTAAGAAGATGAAAGAAGAGCAGAAAATGAAAGAAGCACAGGCAAGAGCATTTGCCGAGCATGGAGAGTTAGCACTGATTGCAGTAGATGGTCCTCAAGCTACTACTACAGAAGAAAGAATCTCATTGAGGCCACCAATGCTGCAGGTGGTTAGGTTGGCATCATTTCAGCATTCTCCTTCAGTGCCACCTTTCTTAACATTGTTAAAACAATCTAGAGTTGATGGTGATGACTCTTGGATGGCAAGAGAAGCTGAAGAGAGTAAGGCCAGTGAGGTTGCTGTTGGTGGTGGGGGCGTGTCTGTGGTAATTACTCGTTTTCCAACAGAGCAGAAACGTCCAGTTGGGCCTCTTGTTGTGGTAGGTGTCAAAGATGGAGTTCTCTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTGTCCTTGAGTCATCCTGGTATTCGCTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTGGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCATGATGACTTAGCACAGTTTATGCTTGGAATGGGCTATGCTAATGAAGCACTTCACTTGCCTGGAATATCTAAGCGGTTGGAGTTTGATTTGGCAGTGAAGAGCACTGATTTGAAGAGAGCTCTTCAGTGTCTTCTTACCATGAGTAACAGCAGGGATATAGGACATGATAATACTCCTGGGCTTGGTTTGAATGACATTCTTAATTTACAACAGCATCAAGAGAAAAAACAAGATTTAGTTGATGGCGTTGAGGGTATAGTGAATTTCGCAGAAGAGTTTTTAGATCTTATTGATGCTGCAGATGCTACTGCACAGCGTGAAATTGCTCGTGAAGCTCTCAAAAGGTTAGCTGCAGCTGTTTCAGTGAAAGGGGCTTTGCAAGGTCAAGAGTTGAGAGGGTTAGCATTACGCCTTGCAAATCATGGGGAGCTGACTCGGCTAAATGGTTTGGTAAACAACTTAGTCGCGCTTGGCTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTTTTGGGAGACAATGTTCTAATGGAGAAAGTGTGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACACGGTCGTCCAAGTTTGAGGAACTTGGTTCAGGCCTGGAACCAAATGCTACAGAGAGAGATTGAGCCGAAATCGTCACAGAAGACAGATGCTACATCTGCATTTCTTGCTTCTCTCGAGGAGCCTAAGCTTACAAGTTTGCCAGAAGCAGGAGAGAAACCTCCTATTGAAATCTTACCTCCTGGGATGGCGTCTCTTAATGCTCCTCCTATTTCCATCCAGAAAAAACCAGCTTCTGCTGCTCAGAATTCACAACAGCAACCAGGCATGCCATTGGCGATTGAAGCACCTCCTACAGCCACAGCAGCGCCAGAGAGTGCTACACAAATACAACAGCCTGAAGCCAATGATGCACCAGTGACCGATCCACCTCAGCCCGAGGATACCTCAGAGTCCATGCCGGTCCCAGAGTCTGCTCCACCTAAACCAGAGTCAGCAAGTGATAGAACTCCAACACTTAATTGGGAAACCATTCAAGCTGAGTCTACAAGCATTCCACCACCACCAGAGGTCCCACCACCAGTAGCAGAGGCTCGAGAGACTAATGCCCCAACTCCATCTACAGTATCAGCGGCTCATGCCCCAACTCTAACTACA 3972 0.4529 MLRLKAFRPTSDKIVKIQLHPTHPWMVTADVSDRVSVWNWEHHQVIYELKAGGVDERRLVGVKLEKLAEGETESKGKPTESIRGGSVKQVAFYDDDICFWQHWHNRSSAAEAPTGVHTSSFSSPAPSTKGRHFLVICCLKKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYTSGIGDGPLVAFGASDGVIRVISMITWKLVRRYSGGHKGSISCLMSFMASSGESLLVSGASDGLLILWSADYGKNSRELVPKLSLKAHDGGVVAVELSRVIGGAPQLITIGADKTLAIWDTISFKELRRLKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPQALAPNKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDPRSLPPVALLPTPSDSREHSAVFVIERELKLLNFQLNNSANPSLGNSSSFSETGRSKGDSFEPLPVKQGKKRISTHVPHDSYSVLSVSNSGKYLAIVWPDIPYFSIYKVNDWSVVDSGSARLLAWDTCRDRFAILESLVPPRIPVVLKGSSSKRAKEAAAAQAAAAAFAAAASSSASVQACILLDDGRSNVLMKSVGARSEPVIGLHGGALLGVAYRTSKRVSPIAASVISTIQSMPLSGYGGSGLSSFTPYDDGFSSHRPSEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISCLRPQYRYLGDVAIPYATSAVWHRRQLFVVTPTTVEIVFVDAGVAQIDIESKKMKEEQKMKEAQARAFAEHGELALIAVDGPQATTTEERISLRPPMLQVVRLASFQHSPSVPPFLTLLKQSRVDGDDSWMAREAEESKASEVAVGGGGVSVVITRFPTEQKRPVGPLVVVGVKDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVGAVKWASRLGREHHDDLAQFMLGMGYANEALHLPGISKRLEFDLAVKSTDLKRALQCLLTMSNSRDIGHDNTPGLGLNDILNLQQHQEKKQDLVDGVEGIVNFAEEFLDLIDAADATAQREIAREALKRLAAAVSVKGALQGQELRGLALRLANHGELTRLNGLVNNLVALGLGREAAFAAAVLGDNVLMEKVWQDTGMLAEAVLHAHAHGRPSLRNLVQAWNQMLQREIEPKSSQKTDATSAFLASLEEPKLTSLPEAGEKPPIEILPPGMASLNAPPISIQKKPASAAQNSQQQPGMPLAIEAPPTATAAPESATQIQQPEANDAPVTDPPQPEDTSESMPVPESAPPKPESASDRTPTLNWETIQAESTSIPPPPEVPPPVAEARETNAPTPSTVSAAHAPTLTT 1324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0192 1324 MobiDBLite consensus disorder prediction 1306 1324 - -
Lal5g0192 1324 Coils Coil 753 773 - -
Lal5g0192 1324 PANTHER TSET COMPLEX MEMBER TSTF 1 1187 - -
Lal5g0192 1324 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Lal5g0192 1324 MobiDBLite consensus disorder prediction 1165 1324 - -
Lal5g0192 1324 MobiDBLite consensus disorder prediction 1270 1289 - -
Lal5g0192 1324 MobiDBLite consensus disorder prediction 1227 1257 - -
Lal5g0192 1324 MobiDBLite consensus disorder prediction 441 470 - -
Lal5g0192 1324 MobiDBLite consensus disorder prediction 1201 1215 - -
Lal5g0192 1324 SUPERFAMILY WD40 repeat-like 7 316 IPR036322 GO:0005515
Lal5g0192 1324 SMART WD40_4 250 292 IPR001680 GO:0005515
Lal5g0192 1324 SMART WD40_4 1 39 IPR001680 GO:0005515
Lal5g0192 1324 SMART WD40_4 198 241 IPR001680 GO:0005515
Lal5g0192 1324 Coils Coil 1029 1049 - -
Lal5g0192 1324 Gene3D - 909 1160 - -
Lal5g0192 1324 PANTHER TSET COMPLEX MEMBER TSTF 1 1187 - -
Lal5g0192 1324 Gene3D - 3 392 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0192 Lal-Chr5 1661306 1675615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0192 - - lang:109330065 2335.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1416 3 20062522 20077138 Lal5g0192 5 1661306 1675615 LSH