Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1416 ATGCTTCGATTGAAAGTGTTTCGACCTACGACTGATAAAATCGTTAAGATCCAATTGCATCCTACGCATCCATGGATGGTAACTGCTGATGATTCAGATCGTGTTTCCGTTTGGAATTGGCAACATCGTCAGGTCATATATGAGTTGAAAGCTGGTGGAGTTGATGAGCGACGTTTGGTTGGTGCTAAATTAGAGAAGCTCGCTGAAGGAGAAACAGAGTCCAGAGGGAAACCCACAGAAGCCATTCGTGGAGGAAGTGTTAAGCAGGTGACTTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGTTCTTCAGCCGCAGAGGCTCCGACAGCTGTTCATACTTCATCTTTTAGTTCTCCTGCCCCATCAACAAAAGGGAGGCATTTTCTAGTTATATGTTGTTTAAATAAAGCTATATTTCTGGATTTGGTGACGATGCGTGGTCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTCTGCATGGAGTTCCTTTATAGATCTGGGGTTGCTGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGTGTCATCAGAGTTCTCTCAATGATCACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCAATCTCTTGCTTGATGTCGTTCATGGCGGCTTCTGGTGAGGCTCTCCTGGTTTCTGGTGCTAGTGATGGATTGCTCATACTTTGGAGTGCGGACCATGGACAGGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGTGGGGTCGTGGCAGTTGAGCTATCACGGGTGATGGGAGGTGCCCCTCAGCTAATTACAATTGGTGCAGATAAGACATTAGCTATCTGGGACACAGTCTCCTTTAAGGAGCTACGACGTATAAAGCCAGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGAGCCACCCTAGAGCTCCAAACCTTGATATTTTAACTTGCGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACTTATTCTGCGCTCACAAGACCATTGTGTGAATTGACCTCAGTTATTCCTCCACAAGCTCTTGCTCCTAATAAGAAACTAAGGGTGTATTGCATGGTTGCACATAGTTTGCAGCCACATCTTGTTGCTACTGGAACCAATATTGGCGTTATCATCTGCGAGTTTGATCCCAGATCTCTTCCCCCTGTTGCTCCCCTCCCAACCCCATCAGACAGCAGGGAGCACTCTGCCATATTTGTAATTGAAAGAGAGCTAAAGCTATTAAATTTTCAGTTAAACAACTCAGTAAATGCATCTCTTGGAAACAATAGCTCCTTGTCAGAAACAGGAAGATCCAAGGGAGATTTTTTTGAACCATTACCTGTCAAGCAGGGCAAGAAGCACATTAGTACACCTGTTCCTCATGATTCATACTCAGTTCTTTCTGTGAGCAGTTCAGGAAAGTACCTGGCAATAGTTTGGCCAGATATTCCTTATTTTTCAGTGTACAAGGTTAGTAATTGGTCAATTGTTGACTCCGGAAGTGCAAGGCTTCTTGCTTGGGATACATGTCGGGATAGATTTGCTATATTGGAATCATCAGTAGCTCCTAGAATTCCTTTAGTTCCCAAGGGTAGTTCATCAAAAAGAGCGAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCAGCTGCTGCAGCTGCTTCCTCTGCTTCCGTTCAAGTTCGCATCTTGTTAGATGATGGAACATCAAATATACTAATGAGGTCTGTTGGTGCACGCAGTGAACCGGTCATTGGTTTGCATGGAGGGGCATTGCTTGGTGTTGCCTATCGAACATCTAGGAGAGTCAGTCCCATTGCTGCTACAGCTATTTCAACAATCCAGTCTATGCCCTTATCAAGTTTTGGGGGCAGTGGCCTTTCTTCCTTTACTACTTATGATGATGGATTTTCTTCACATAGATCATCTGAGGCGGCTCCTCAGAACTTCCAGCTTTACAGTTGGGAGACATTCCAGCCTGTGGGGGGTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACTGTGGAGTACTGTGCATTTGCATACCATCAATACATAGTTATGTCTTGTTTGCGCCCACAATATAGATACCTGGGAGATGTTGCAATTCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTTGTTACACCAACTACTATAGAAATTGTGTTTGTGGATGCTGGGGTTGCACAAATTGACATTGAAACTAAGAAGTTGAAAGAAGAGCAGAAATTGAAAGAAGCACAGGCAAGAGCAGTAGCTGAGCATGGAGAGTTAGCATTAATTGCAGTAGATGGTCCCCAAACTACTACTACAGAAGAAAGAATGTCGTTGAGGCCACCGATGCTGCAGGTGGTTCGGTTGGCATCTTTTCAGCATTCTCCTTCAGTGCCACCTTTCTTAACATTGTTAAAACAATCTAGAGTTGATGGTAATGACTCTTGGATGGCAACAGAAGAGAGAAAAGCCAGTGAGGTTGCTGTTGGTGGTGGGGGTGTGTCTGTGGCAGTTACTCGTTTCCCAGCGGAGCAGAAACGCCCAGTTGGGCCTCTTGTTGTGGTAGGTGTCAGAGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTGTCCTTAAGTCATCCTGGTATCCGTTGCCGATGTCTTGCTGCTTACGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCATGATGATTTAGCACAGTTTATGCTTGGAATGGGCTATGCTAATGAAGCACTTCATCTACCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCACTGATTTGAAGAGAGCTCTTCAGTGTCTCCTTACCATGAGTAACAGCAGGGATATAGGATATGATAATACTCCTGGGCTTGGTTTAAATGACATTCTGAATTTACAACATCAAGAGAAAAAACAAGATTTAGCTGATGGTGCTGATGGTGTTGAGGGTATAGTGAAATTTGCGAAAGAGTTCTTGGATCTTATTGATGCTGCAGATGCTACTGCACAGGGTGAAATTGCTCGTGAAGCTCTCAAGAGGTTAGCTGCAGCTGGTTCAGTGAAAGGTGCCTTGCAAGGTCATGAGTTGAGAGGATTAGCATTACGCCTTGCAAATCATGGAGAACTGACACGGCTAAGTGGTTTGGTAAACAACTTAGTCACACTTGGCTTGGGACGGGAAGCTGCATTTGCTGCTGCTGTTTTGGGAGACAATGTTCTAATGGAAAAAGCATGGCAGGATACTGGAATGCTGGCGGAGGCTGTGCTTCATGCTCATGCACATGGTCGTCCAACTTTGAGGAACTTGGTTCAGTCCTGGAACCAAATGCTGCAGAGAGAGATTGAGCCGACTCCATCACAGAAGACAGATGCTACAGCTGCATTTCTTGCTTCTCTTGAGGAGCCTAAACTTACAAGTTTGGCCGATGCAGGGAAGAAGCCACCTATTGAAATCTTACCTCCTGGGATGGCATCTCTTAATGCTCCTCCTATCTCCATCCAGAAGAAACCAGTTTCTGCTGCTCAGAATTCACAACAACCAGGCAAGCCATTGGCAATTGAAGCACCTCCTACTGCCACAGCAGTACCAGAGAGTGCTACACAGACACAGCAGCCTGAAGCCACTGGTGCACCAGTACCCGATCCATCTCCACCCGAGGTTACTTCAGAGTCCACACCGGTTCCAGAGGCTACTCCGCCTAAACCAGAATCGGGTGAAACCATTGTAGATGATGGACATCCTACCTTTGCATCAGCAAGTGATGGAACTCCAACTGTTAATGGGGAAACCGTTCAAGCAGAGTCTGCGAGCAATCTATCACCACCTGAGGTCCCGTCACCGGTAGTAGAAGCTCCAGAGGCTAATGCCCCAAGTACATCTACAGTACCCGCGACTAATGCCCCAAGTACATCTACAGTACCCGCGACTAATGCCCCAAGTCCAACTACAGTACCCACAACTAATGCCCCAAGTCCAACTACAGTACCTCCTACTCCTACTGACCCATTCTTCCTATGA 4107 0.4587 MLRLKVFRPTTDKIVKIQLHPTHPWMVTADDSDRVSVWNWQHRQVIYELKAGGVDERRLVGAKLEKLAEGETESRGKPTEAIRGGSVKQVTFYDDDVRFWQLWHNRSSAAEAPTAVHTSSFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRSGVADGPLVAFGASDGVIRVLSMITWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWSHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPQALAPNKKLRVYCMVAHSLQPHLVATGTNIGVIICEFDPRSLPPVAPLPTPSDSREHSAIFVIERELKLLNFQLNNSVNASLGNNSSLSETGRSKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSNWSIVDSGSARLLAWDTCRDRFAILESSVAPRIPLVPKGSSSKRAKEAAAAQAAAAAAAAASSASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPIAATAISTIQSMPLSSFGGSGLSSFTTYDDGFSSHRSSEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYHQYIVMSCLRPQYRYLGDVAIPYATSAVWHRRQLFVVTPTTIEIVFVDAGVAQIDIETKKLKEEQKLKEAQARAVAEHGELALIAVDGPQTTTTEERMSLRPPMLQVVRLASFQHSPSVPPFLTLLKQSRVDGNDSWMATEERKASEVAVGGGGVSVAVTRFPAEQKRPVGPLVVVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYANEALHLPGISKRLEFDLAMKSTDLKRALQCLLTMSNSRDIGYDNTPGLGLNDILNLQHQEKKQDLADGADGVEGIVKFAKEFLDLIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAAAVLGDNVLMEKAWQDTGMLAEAVLHAHAHGRPTLRNLVQSWNQMLQREIEPTPSQKTDATAAFLASLEEPKLTSLADAGKKPPIEILPPGMASLNAPPISIQKKPVSAAQNSQQPGKPLAIEAPPTATAVPESATQTQQPEATGAPVPDPSPPEVTSESTPVPEATPPKPESGETIVDDGHPTFASASDGTPTVNGETVQAESASNLSPPEVPSPVVEAPEANAPSTSTVPATNAPSTSTVPATNAPSPTTVPTTNAPSPTTVPPTPTDPFFL 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1416 1368 Gene3D - 903 1157 - -
Lal3g1416 1368 MobiDBLite consensus disorder prediction 1353 1368 - -
Lal3g1416 1368 SMART WD40_4 1 39 IPR001680 GO:0005515
Lal3g1416 1368 SMART WD40_4 250 292 IPR001680 GO:0005515
Lal3g1416 1368 SMART WD40_4 198 241 IPR001680 GO:0005515
Lal3g1416 1368 MobiDBLite consensus disorder prediction 1224 1239 - -
Lal3g1416 1368 MobiDBLite consensus disorder prediction 1170 1368 - -
Lal3g1416 1368 MobiDBLite consensus disorder prediction 1316 1352 - -
Lal3g1416 1368 Gene3D - 3 393 IPR015943 GO:0005515
Lal3g1416 1368 MobiDBLite consensus disorder prediction 1240 1263 - -
Lal3g1416 1368 SUPERFAMILY WD40 repeat-like 4 336 IPR036322 GO:0005515
Lal3g1416 1368 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Lal3g1416 1368 PANTHER TSET COMPLEX MEMBER TSTF 1 1185 - -
Lal3g1416 1368 MobiDBLite consensus disorder prediction 1281 1305 - -
Lal3g1416 1368 PANTHER TSET COMPLEX MEMBER TSTF 1 1185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1416 Lal-Chr3 20062522 20077138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1416 - - lang:109330065 2279.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1416 3 20062522 20077138 Lal5g0192 5 1661306 1675615 LSH