Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0186 ATGGCTTCTATCAATGGAGACTCAATTTCTCACACTCCCAAAAAACCAAAACTCTCATTTTCATTTTCATCTTCATCTTCTTCTTCTTCTTCCATCATTGCTCAATCCGAATTCTCTCACCACGATCCTTCCATTGCTCGCATCAACAACGGCAGCTTCGGTTGTTGCCCAGCCTCCGTCATCGCCGCCCAACAACACTGGCAGCTCAAGTATCTCCGGCAACCAGATCATTTCTACTTCAACGTCCTCAAAAAAGGGATCCTTCAATCAAGAACAATAATCAAACACCTCGTGAACGCGGAACACGTCGACGAGATTTCCATCGTCGATAACGCCACCACCGCCGCCGCCATCGTCCTCCAGAACGCCGCATGGTCGTTCCATGAAGGACGGTTCAAGAAAGGCGATGTCGTCGTCATGCTTCATTACGCGTATGGTGCGGTTAAGAAATCAATTGAAGCGTATATTACACGCGCTGGAGGTAACGTTATTGAAGTGAATCTTCCTTTTCCTGTTACTTCGGATGATGAAATTGTTTCTGAATTTAAGAATGCTTTAGAGAGAGGGAAGAGTGATGGGAATAGGGTTAGGTTAGCTGTTATTGATCATATTACTTCGATGCCAAGTGTCGTGATTCCGGTTAAGGATTTGGTTAGGATTTGTAGGGAGGAAGGTGTTGATCAGGTTTTCATTGATGCTGCTCATTCAATTGGGTGTATTGATGTTGATATGAAGGAGATCGGCGCCGATTTTTACACTAGCAATTTGCATAAGTGGTTATTTTGCCCTCCTTCGATCGCGTTCCTGTATTGCAGGAAGATGCCTAAGGGTTCCAATTTGCACCATCCGGTTGTGTCGCATGAGTATGGCAATGGGTTGGCTGTGGAGAGTGCTTGGATTGGGACTAGGGATTATAGTGCTCAATTGGTGGTTCCCGCGGCTTTGGAATTCGTTAATAGGTTTGAAGGAGGTATTGAAGGGATCAAGAAGAGGAATCATGATGCTGTTGTGGAGATGGGAGAGATGCTGGTGAAAGCGTGGGGAACTCATCTAGGGAGTCCTCCGGATATGTGTGGTAGCATGATCATGGTAGGTTTGCCAGCTTGTTTGGGGATTAGTAGTGATGCGGATGCTCTTAAGTTAAGGACACATTTGAGGGATCATTTTGGTGTTGAAGTTCCGATCTATTATCGACCACCAAGAGATGGAGAAGTTGGGCCGATAACCGGATATGCCCGAATTTCTCATCAAGTCTATAACACAGTTGACGACTACTACAAGTTCAGGGACGCAGTTAACCAACTTGTGGACAAAGGATTTACTTGCACTCTTCTTTCCAAGTGA 1344 0.4546 MASINGDSISHTPKKPKLSFSFSSSSSSSSSIIAQSEFSHHDPSIARINNGSFGCCPASVIAAQQHWQLKYLRQPDHFYFNVLKKGILQSRTIIKHLVNAEHVDEISIVDNATTAAAIVLQNAAWSFHEGRFKKGDVVVMLHYAYGAVKKSIEAYITRAGGNVIEVNLPFPVTSDDEIVSEFKNALERGKSDGNRVRLAVIDHITSMPSVVIPVKDLVRICREEGVDQVFIDAAHSIGCIDVDMKEIGADFYTSNLHKWLFCPPSIAFLYCRKMPKGSNLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAALEFVNRFEGGIEGIKKRNHDAVVEMGEMLVKAWGTHLGSPPDMCGSMIMVGLPACLGISSDADALKLRTHLRDHFGVEVPIYYRPPRDGEVGPITGYARISHQVYNTVDDYYKFRDAVNQLVDKGFTCTLLSK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0186 447 SUPERFAMILY PLP-dependent transferases 38 437 IPR015424 -
Lal5g0186 447 Gene3D - 58 320 IPR015421 GO:0003824
Lal5g0186 447 Pfam Aminotransferase class-V 59 341 IPR000192 -
Lal5g0186 447 PANTHER L-CYSTEINE DESULFHYDRASE 2 446 - -
Lal5g0186 447 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 2 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0186 Lal-Chr5 1618065 1619408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0186 K22207 - gmx:100793745 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0186 5 1618065 1619408 Lal5g0186 5 1618065 1619408 ECH
Lal5g0186 5 1618065 1619408 Lal13g0594 13 3874715 3879007 PCT
Lal13g0594 13 3874715 3879007 Lal5g0186 5 1618065 1619408 PCT