Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0594 ATGGCCTCTCACCAAAACGGCGACGTTTCTTCCCACATTCCCAAAAAACCTAAACTCTCTTCTACCATTACGGACTCAGAAATTCAATCCGAATTCTCTCACCATGACCCCTCCGTCGCGAGAATCAACAACGGCAGCTTCGGCTGCTGCCCCGCCTCCGTCATCTCCGTCCAGCACCACTGGCAACTAAAAAATCTCCGTCAACCGGATCACTTCTACGTTAACCACCTCAAACATGGTATTCTTAATTCAAGAACCATCATTAAGAACCTCGTCAACGCTGAACACCTTGACGAGATTGCTATCGTTGATAACGCCTCCACCGCCACCACCATCGTCCTCCAACAAACCGCTTGGTCCTTCCACGAAGGAAGGTTCCAGAAAGGTGACGTTGTCGTCGTTCTTCACTACGCTTATGGTGCTGTTAAGAAATCCATTGAGGCCTACGTGGCACGCGCTGGAGGTAAAGTCATCGAGGTGCAGCTTCCTTTTCCGGTAAAATCAAACGATGAAATTATAACAGAATTTAGAACTGCTTTAGAGAGAGGGAAGGGTAATGGTAATAGGGTTAGGTTAGCAGTTATTGACCATGTGACTTCGATGCCTAGTGTTGTGATTCCTGTGAAGGAGTTGGTTAAGATTTGTAGAGAGGAAGGGGTGGATCAGGTTTTTATTGATGCAGCTCATGCTATTGGGTGTATTGATGTTGATATGCAAGAAATTGGGGCTGATTTCTACACTAGCAATTTGCATAAGTGGCTGTTTTGTCCACCTTCGATTGCGTTTTTATACACTCGCAGGTCGTTGAAGTGTAAGGATTTGCATCATCCTGTTGTATCTCATGAGTATGGGAAGGGTTTGGCTTCGGAGAGTGCTTGGATTGGGAATAGGGATTATAGCTCGCAATTGGTGGTTCCAGCGGTTTTGGAATTTGTTAATAGGTTTGAGGGTGGGATTGAAGGGATTAAGAAGAGGAACCATGATGCTGTATTTGAGATGGGTGAAATGTTGGCTGCGGCCTGGGGGACTCATCTTGGGAGTCCAAAGGAGATGTGTGCAAGCATGGTGATGGTGGGTTTACCTGCTTGTTTGGGGATTAGTAGTGATTCTGATGCTATGAAGTTGAGGACTCATTTGAGGGATGATTTTGGAATTGAAGTTCCGATATATTTTCGACCACCGAGAGATGGGGAAGTTGGACTGCTAACTGGGTATGCTAGAATTTCTCATCAAGTTTACAACAGAATTGATGACTATTCCAAGTTCAGGGATGCAGTTAATCAACTCACAAGATGTGTCAAAGAAGTCTTTTACATGAATAACCGCAATGGTTCTGTGGTTGCCTAA 1347 0.4514 MASHQNGDVSSHIPKKPKLSSTITDSEIQSEFSHHDPSVARINNGSFGCCPASVISVQHHWQLKNLRQPDHFYVNHLKHGILNSRTIIKNLVNAEHLDEIAIVDNASTATTIVLQQTAWSFHEGRFQKGDVVVVLHYAYGAVKKSIEAYVARAGGKVIEVQLPFPVKSNDEIITEFRTALERGKGNGNRVRLAVIDHVTSMPSVVIPVKELVKICREEGVDQVFIDAAHAIGCIDVDMQEIGADFYTSNLHKWLFCPPSIAFLYTRRSLKCKDLHHPVVSHEYGKGLASESAWIGNRDYSSQLVVPAVLEFVNRFEGGIEGIKKRNHDAVFEMGEMLAAAWGTHLGSPKEMCASMVMVGLPACLGISSDSDAMKLRTHLRDDFGIEVPIYFRPPRDGEVGLLTGYARISHQVYNRIDDYSKFRDAVNQLTRCVKEVFYMNNRNGSVVA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0594 448 Pfam Aminotransferase class-V 73 271 IPR000192 -
Lal13g0594 448 Gene3D - 52 314 IPR015421 GO:0003824
Lal13g0594 448 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 3 430 - -
Lal13g0594 448 MobiDBLite consensus disorder prediction 1 27 - -
Lal13g0594 448 SUPERFAMILY PLP-dependent transferases 32 429 IPR015424 -
Lal13g0594 448 PANTHER L-CYSTEINE DESULFHYDRASE 3 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0594 Lal-Chr13 3874715 3879007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0594 K22207 - gmx:100786129 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0594 13 3874715 3879007 Lal13g0594 13 3874715 3879007 ECH
Lal5g0186 5 1618065 1619408 Lal13g0594 13 3874715 3879007 PCT
Lal13g0594 13 3874715 3879007 Lal5g0186 5 1618065 1619408 PCT