Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0133 AGTGTAGTTGTAATTTCTCTCATTACAGAAAAAATGCATTCGTTTCTGTACAGAGCTAACGTGTTATTATCCTTCGCCATTACGATTCTAGGTGTTGTTTGCGCCATAGCTTCTTTCACTGATAACTTCAACAATCCTACACCTCATGCTCAAGTCAAGGTTTTGAATATTAATTGGTTCCAAAAACAACCTAACGGCAACGATGAGGTCAGCATGACACTGAATATATCAGCAGATTTACAGTCACTTTTCACATGGAACACAAAACAGAATTTCATGGCTGTCCAGGACTCAGCTTTGCCTCTTTTTATATGTTTGCAGGTCTTTGTCTTTTTAGCTGCTGAGTATGAAACTCCAAAGAATGCCGTGAATCAGATATCCCTGTGGGATGGTATCATTCCTTCTAAAGAGCATGCAAAGTTTTGGACTCATACTTCAAATAAATACCGCTTCATTGATCAGGGAAGCAATTTGCGTGGTAAAGAATTCAACTTGACTATGCACTGGCACATCATGCCCAAGACTGGGAAAATGATTGCTGACAAAATAGTGATACCAGGTTACAAATTGCCAGCAGAATATAGATGA 588 0.3895 SVVVISLITEKMHSFLYRANVLLSFAITILGVVCAIASFTDNFNNPTPHAQVKVLNINWFQKQPNGNDEVSMTLNISADLQSLFTWNTKQNFMAVQDSALPLFICLQVFVFLAAEYETPKNAVNQISLWDGIIPSKEHAKFWTHTSNKYRFIDQGSNLRGKEFNLTMHWHIMPKTGKMIADKIVIPGYKLPAEYR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0133 195 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 12 195 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal5g0133 195 PIRSF SPC3 105 195 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal5g0133 195 PIRSF SPC3 12 97 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal5g0133 195 Pfam Signal peptidase subunit 12 95 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal5g0133 195 Pfam Signal peptidase subunit 107 192 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal5g0133 195 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 3 12 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0133 Lal-Chr5 1209942 1212620 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0133 K12948 - gmx:100306631 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1474 3 20641756 20646113 Lal5g0133 5 1209942 1212620 LSH
Lal5g0133 5 1209942 1212620 Lal3g1474 3 20641756 20646113 LSH