Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1474 ATGCATTCGTTTGGTTATAGATTGAACGCGTTATTCACATTCGCTTTAACCATTCTCGCTCTTATCTGCGCCATCGCTTCTTTTACTGATACATTCAATCACCCTAACCCTCTCGCTCAAGTCAAGGTTTTGAACATTAACTGGTTTCAAAAACAACCTCATGGCAATGACGAGGTCAGCCTGACACTAAATATATCGGCAGATTTACAGTCACTTTTCACTTGGAACACAAAACAGGTTTTTGTCTTTTTAGCTGCTGAGTATGAAACTAAAAAGAATGCCTTGAACCAGATATCCCTGTGGGATGGAATCATTCAATCTAAAGAACAAGCTAAGTTTTGGACTCATACTTCAAACAAGTACCGCTTCATTGATCAGGGAAGCAATTTGCGAGGTAAAGAATTCAACTTGACTATGCACTGGCATGTCATGCCCAAGACTGGAAGAATGTTAGCAGACAAAATAGTCATGCCAGGTTACCGATTGCCAGAAGAATATAGATGA 504 0.3988 MHSFGYRLNALFTFALTILALICAIASFTDTFNHPNPLAQVKVLNINWFQKQPHGNDEVSLTLNISADLQSLFTWNTKQVFVFLAAEYETKKNALNQISLWDGIIQSKEQAKFWTHTSNKYRFIDQGSNLRGKEFNLTMHWHVMPKTGRMLADKIVMPGYRLPEEYR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1474 167 PIRSF SPC3 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal3g1474 167 Pfam Signal peptidase subunit 1 165 IPR007653 GO:0005787|GO:0006465|GO:0016021
Lal3g1474 167 PANTHER SIGNAL PEPTIDASE COMPLEX SUBUNIT 3 1 167 - -
Lal3g1474 167 PANTHER MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 1 167 IPR007653 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1474 Lal-Chr3 20641756 20646113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1474 K12948 - mnt:21385555 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1474 3 20641756 20646113 Lal3g1474 3 20641756 20646113 ECH
Lal3g1474 3 20641756 20646113 Lal5g0133 5 1209942 1212620 LSH
Lal5g0133 5 1209942 1212620 Lal3g1474 3 20641756 20646113 LSH