Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0122 ATGGGCATGAAAAGCACAGAACCAACAATCCCACTTTCAAGTCCTTTACTTTCCAGAAACAACGTTGAATCCAACCATGAAAATGATGAAGAAACTTCTTCTGTACCAACTATTCTTATTCTCACTACCCTTGTTGCTGTTTTTGGTTCTTATGTTTTTGGCTCTGCTGTGGGTTATTCCTCCCCTTCTCAATCTGGAATCATGAATGACCTCAATCTTGGTGTGGCCCAGTATGCAATTTTTGGTTCAATACTGACAATTGGAGCAATGATTGGTGCCATTGCTAGTGGTAAAATAGCAGATTACACAGGTCGTCGAGTTGCCATGGGATTCTCTCAGCTATTCTGCATATTTGGATGGATTGCCATAGCATTTTCTAAGGTTGCTTGGTGGCTTTACATTGGAAGACTTTTGGTAGGATGTGGAATCGGCCTTCTATCTTATGTGGTACCAGTTTATGTAGCAGAAATAACACCCAAGAATCTCAGAGGGGCATTCACTGCAGTACATCAGCTAATGATTTGTTTGGGGATGTCGTTAACTTATCTTATCGGAGCATACTTGAATTGGCGGATCGTGGCTCTAATCGGGACTATTCCATGTCTTATACAGCTTTTAAGTCTACCCTTCATCCCAGATTCTCCGAGGTGGCTGGCAAAGATTGGTAACATGAAAGAGAGTGATTCTGCTCTACAGCGCCTTAGAGGAAAAAATGCCGATGTTTATCAAGAGGCCACAGAAATTAAAGAGTATACAGAAGCCCTTCAGCAGCAAACAGAATCTAGCATTATCGGCTTATTTCAAATTCAGTATTTGAAGGCACTTACTGTTGGAGTTGGCTTGATGATACTGCAACAGTTTGGAGGGATTAATGGCATTGTCTTTTATGCAAATTCTATATTTATCTCAGCTGGGTTTTCAGAGAGTATTGGAACAATTGCAATGGTTGCTGTTAAGATTCCAATGACAACTTTGGGAGTACTTTTGATGGACAAATCCGGAAGACGACCACTTCTGCTGGTTTCTGCGGTAGGAACATGCCTAGGATGCTTCCTTGCAGCCATATCATTCTTCTTGCAGGACTTACATAAATGGAAGGAAATCAGTCCGATTTTAGCGCTTGTCGGCGTCCTGGTATATGTAGGATCTTACTCACTAGGCATTGGAGCAATTCCTTGGGTTATAATGTCTGAGATATTTCCCATTAATGTTAAGGGCTCTGCTGGGAGTTTTGTTACATTGGTTAACTGGTTATGTTCTTGGATTGTATCATATGGTTTCAACTTTCTCATGAGTTGGAGTTCTTCTGGAACATTCTTAATATTTTCTATCATATGTGGTTTCACTGTATTATTTGTAGCAAAACTAGTGCCAGAAACTAAGGGATGTACACTAGAAGAAATTCAAGCTTCTTTAAATTCATACTCAACAAAGAGATGA 1440 0.4028 MGMKSTEPTIPLSSPLLSRNNVESNHENDEETSSVPTILILTTLVAVFGSYVFGSAVGYSSPSQSGIMNDLNLGVAQYAIFGSILTIGAMIGAIASGKIADYTGRRVAMGFSQLFCIFGWIAIAFSKVAWWLYIGRLLVGCGIGLLSYVVPVYVAEITPKNLRGAFTAVHQLMICLGMSLTYLIGAYLNWRIVALIGTIPCLIQLLSLPFIPDSPRWLAKIGNMKESDSALQRLRGKNADVYQEATEIKEYTEALQQQTESSIIGLFQIQYLKALTVGVGLMILQQFGGINGIVFYANSIFISAGFSESIGTIAMVAVKIPMTTLGVLLMDKSGRRPLLLVSAVGTCLGCFLAAISFFLQDLHKWKEISPILALVGVLVYVGSYSLGIGAIPWVIMSEIFPINVKGSAGSFVTLVNWLCSWIVSYGFNFLMSWSSSGTFLIFSIICGFTVLFVAKLVPETKGCTLEEIQASLNSYSTKR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0122 479 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 461 IPR020846 GO:0022857
Lal5g0122 479 MobiDBLite consensus disorder prediction 1 30 - -
Lal5g0122 479 PANTHER - 18 475 - -
Lal5g0122 479 CDD MFS_GLUT6_8_Class3_like 40 467 IPR044775 GO:0008643|GO:0051119
Lal5g0122 479 PRINTS Sugar transporter signature 50 60 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal5g0122 479 PRINTS Sugar transporter signature 133 152 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal5g0122 479 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal5g0122 479 PRINTS Sugar transporter signature 374 395 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal5g0122 479 PRINTS Sugar transporter signature 397 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal5g0122 479 TIGRFAM SP: MFS transporter, sugar porter (SP) family 73 468 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal5g0122 479 MobiDBLite consensus disorder prediction 1 22 - -
Lal5g0122 479 Pfam Sugar (and other) transporter 43 470 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal5g0122 479 Gene3D MFS general substrate transporter like domains 31 474 IPR036259 -
Lal5g0122 479 PANTHER GENERAL SUBSTRATE TRANSPORTER 18 475 - -
Lal5g0122 479 SUPERFAMILY MFS general substrate transporter 28 469 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0122 Lal-Chr5 1116371 1121628 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0122 25 403 Organic Solute Cotransporters AT1G54730 64.380 1.63e-173 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0122 K03444 - gmx:100780074 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1939 1 21518707 21523113 Lal5g0122 5 1116371 1121628 ECH
Lal5g0122 5 1116371 1121628 Lal5g0122 5 1116371 1121628 ECH