Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1658 ATGTCTTCTCCAGCAGATAGAAGCAAGAGCATAAAGGTGGAACGCTACAAATATTACATGAGAAGAGTGAACAGCAGAAAAGTTGTTAATGCATCTTCTAATCTTCTCTTCAGTGTCACTCTCCTCATATCACTTATCTTTGTTTTCCTCTTCACTTTCAAGTACCCTTCACACGAATACAACACACAAACCCATTTTCTGTCCTTTGATTTCACCAGTGGAGACACATGGGAAAAACAGGTCCTTCACTCCTCCACCCCACGCGACCCCAAAGGGATTACAGTCTTGGTCACCGGTGCTGCTGGATTCATTGGGGCACACTGTTCGCTTGCCTTCAAAAAACGTGGAGATGGTGTTGTTGGACTTGATAACTTTAATAGCTATTATGATCCCTCCTTGAAGCGTGCACGACAAGCGCTTCTTAAGCAACACCAAATCTTCATCGTTGAAGGAGATTTGAATGACACATTGTTGCTCTCCAAACTATTTCATCGTGTGCCCTTCACTCACATCCTCCACTTAGCAGCTCAAGCAGGGGTTCGCTATGCCATGCAAAATCCACAATCTTACATCAATTCGAATATCATGGGTTTCGTAAACCTTCTAGAAGTTGCAAAAATTGCTAAACCACAACCTAGTATTGTTTGGGCATCTTCTAGTTCAGTGTATGGGCTTAACACTGATAACCCATTCTCAGAGCTTCATAGGACTGACCAACCCGCCAGCCTCTATGCTGCAACCAAAAAAGCGGGTGAGGAAATTGCCCACACTTATAACCATATCTATGGTCTTTCCCTCACTGGATTGCGCTTCTTCACTGTTTATGGCCCTTGGGGAAGACCTGACATGACTTATTTCTTCTTCACCAAGTATATTCTACAGGGAAAGGACATTCATGTCTATCAAACAAAGGATGGGAAGGAGGTGGCGCGTGATTTCACATACATAGATGATATAGTGAAGGGGTGTCTTAGGGCATTAGACACGGTGGAGAAGAGCACCGGTAGTGGTGGCAAGAAGCGAGGTCCAGCACAACTAAGAATATACAATCTAGGAAACACATCACCAGTGAAAGTGGGAACGATGGTTGGAATGTTAGAAGAGTTGTTAAACAAGAAGGCAAAAAAACATGTGATCAAGATGCCCATAAATGGTGATGTACCATATACACATGCTAATGTGAGTTTGGCTTATAAAGAATTAGGCTACAAACCCACCACTGATTTGGCCAAGGGGTTAAAGAAGTTTGTTAAGTGGTATGTTGGCTATTATGGGATTCAGTCCATTCCTGTCACCCATTACCAACAACACCATTCACCTTAA 1323 0.4308 MSSPADRSKSIKVERYKYYMRRVNSRKVVNASSNLLFSVTLLISLIFVFLFTFKYPSHEYNTQTHFLSFDFTSGDTWEKQVLHSSTPRDPKGITVLVTGAAGFIGAHCSLAFKKRGDGVVGLDNFNSYYDPSLKRARQALLKQHQIFIVEGDLNDTLLLSKLFHRVPFTHILHLAAQAGVRYAMQNPQSYINSNIMGFVNLLEVAKIAKPQPSIVWASSSSVYGLNTDNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMTYFFFTKYILQGKDIHVYQTKDGKEVARDFTYIDDIVKGCLRALDTVEKSTGSGGKKRGPAQLRIYNLGNTSPVKVGTMVGMLEELLNKKAKKHVIKMPINGDVPYTHANVSLAYKELGYKPTTDLAKGLKKFVKWYVGYYGIQSIPVTHYQQHHSP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1658 440 Pfam GDP-mannose 4,6 dehydratase 96 415 IPR016040 -
Lal4g1658 440 PANTHER EPIMERASE-RELATED 1 428 - -
Lal4g1658 440 Gene3D - 96 407 - -
Lal4g1658 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 88 425 IPR036291 -
Lal4g1658 440 PRINTS Nucleotide sugar epimerase signature 121 137 - -
Lal4g1658 440 PRINTS Nucleotide sugar epimerase signature 311 326 - -
Lal4g1658 440 PRINTS Nucleotide sugar epimerase signature 346 361 - -
Lal4g1658 440 PRINTS Nucleotide sugar epimerase signature 386 403 - -
Lal4g1658 440 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 428 - -
Lal4g1658 440 Gene3D - 272 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1658 Lal-Chr4 20630378 20631967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1658 1 427 Miscellaneous Gene Families AT3G23820 72.748 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1658 K08679 - zju:107422361 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1658 4 20630378 20631967 Lal17g1682 17 17989007 17991197 LSH